RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C1QC	P02747	245 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	MVD	P53602	400 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	EEFSEC	P57772	596 aa	Known RBP	20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	DSTN	P60981	165 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	CYP51A1	Q16850	503 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	COX20	Q5RI15	118 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	IGFL3	Q6UXB1	125 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	HORMAD2	Q8N7B1	307 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	ZNF441	Q8N8Z8	693 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	OR10A6	Q8NH74	314 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	FBXO30	Q8TB52	745 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	TM9SF4	Q92544	642 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	VSTM2L	Q96N03	204 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	OR7D2	Q96RA2	312 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	STAC	Q99469	402 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	SPATA9	Q9BWV2	254 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	SLC25A18	Q9H1K4	315 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	LRMDA	Q9H2I8	198 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	KAT8	Q9H7Z6	458 aa	Known RBP	20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	GIN1	Q9NXP7	522 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	ABCD2	Q9UBJ2	740 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	EXPH5	Q8NEV8	1989 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	ATM	Q13315	3056 aa		20.28	■□□□□ 0.84
LTBP4-227	ENST00000600026	TMEM247	A6NEH6	219 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	ERICH4	A6NGS2	130 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	CYSRT1	A8MQ03	144 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	NME4	O00746	187 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	DNAJA2	O60884	412 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	NME6	O75414	186 aa	Predicted RBP	20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	DNAJC8	O75937	253 aa	Predicted RBP	20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	WDPCP	O95876	746 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	F10	P00742	488 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	ACP2	P11117	423 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	ETFA	P13804	333 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	PPIC	P45877	212 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	SPATS1	Q496A3	300 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	SAMD4B	Q5PRF9	694 aa	Known RBP	20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	ATAD3B	Q5T9A4	648 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	SERPINA11	Q86U17	422 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	HPS6	Q86YV9	775 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	GPR151	Q8TDV0	419 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	MCUR1	Q96AQ8	359 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	RNF32	Q9H0A6	362 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	PIGU	Q9H490	435 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	SERHL2	Q9H4I8	314 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026		Q9N2J8	555 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	DUSP22	Q9NRW4	184 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	EXD2	Q9NVH0	621 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	PLA2G3	Q9NZ20	509 aa		20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	YARS2	Q9Y2Z4	477 aa	Known RBP	20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	20.27	■□□□□ 0.84
LTBP4-227	ENST00000600026	DPM1	O60762	260 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	ZNF354A	O60765	605 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	OR2J2	O76002	312 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	NKX2-2	O95096	273 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	PRB1	P04280	392 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	OR12D1	P0DN82	309 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	GABRA3	P34903	492 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	CD97	P48960	835 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	MAN2A2	P49641	1150 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	PSPH	P78330	225 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	LIPE	Q05469	1076 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	EXOSC6	Q5RKV6	272 aa	Known RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	GCNT6	Q5T4J0	391 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	WDR53	Q7Z5U6	358 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	SLC44A2	Q8IWA5	706 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	COX18	Q8N8Q8	333 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	SLC16A11	Q8NCK7	471 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	LSM14A	Q8ND56	463 aa	Known RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	C17orf47	Q8NEP4	570 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	OR5D16	Q8NGK9	328 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	XAGE5	Q8WWM1	108 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	HOXB13	Q92826	284 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	ADIPOR1	Q96A54	375 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	SLC35A4	Q96G79	324 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	LCOR	Q96JN0	433 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	BTBD9	Q96Q07	612 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	RASL10B	Q96S79	203 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	THTPA	Q9BU02	230 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	GPR55	Q9Y2T6	319 aa	Predicted RBP	20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	CSAG2	Q9Y5P2	127 aa		20.26	■□□□□ 0.83
LTBP4-227	ENST00000600026	FLNB	O75369	2602 aa	Known RBP	20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	HMGN4	O00479	90 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	NADK	O95544	446 aa	Predicted RBP	20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	BMP2	P12643	396 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	DRD5	P21918	477 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	TRHR	P34981	398 aa	Predicted RBP	20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	PGM1	P36871	562 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	MAP3K8	P41279	467 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	SSR4	P51571	173 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	NR0B1	P51843	470 aa	Known RBP	20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	ARG2	P78540	354 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	TUBA3C	Q13748	450 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	NNAT	Q16517	81 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	DUSP5	Q16690	384 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	PIGG	Q5H8A4	983 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	ZNF468	Q5VIY5	522 aa	Predicted RBP	20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	TUBA3E	Q6PEY2	450 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	ZADH2	Q8N4Q0	377 aa		20.25	■□□□□ 0.83
LTBP4-227	ENST00000600026	RBMXL3	Q8N7X1	1067 aa	Known RBP	20.25	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms