RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 KIR3DP1A8MWS1 328 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 SLC22A2O15244 555 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 TBX19O60806 448 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 WDR1O75083 606 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 GUCY1B2O75343 617 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 DCTN3O75935 186 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 HRGP04196 525 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 IL3P08700 152 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 IL12AP29459 219 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 RAB38P57729 211 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 UFM1P61960 85 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 OLR1P78380 273 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 PDE7AQ13946 482 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 TERF2Q15554 542 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 RIPPLY2Q5TAB7 128 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 FAM91A1Q658Y4 838 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 FUNDC1Q8IVP5 155 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 MIER2Q8N344 545 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 TMEM156Q8N614 296 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 MTERF3Q96E29 417 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 ZNF764Q96H86 408 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 TEX37Q96LM6 180 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 CCDC106Q9BWC9 280 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 ATP6V1HQ9UI12 483 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 FBXW2Q9UKT8 454 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 CES1P1Q9UKY3 287 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 MAPRE3Q9UPY8 281 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 PCDHA9Q9Y5H5 950 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 OR14I1A6ND48 311 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 FAM47E-STBD1D6RA91 191 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 PSMD12O00232 456 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 DVL2O14641 736 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 SLC22A3O75751 556 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 MPDZO75970 2070 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 AIFM1O95831 613 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 CELA3AP09093 270 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 RNH1P13489 461 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 DDCP20711 480 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 PRPS1L1P21108 318 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 IL10P22301 178 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 WNT3P56703 355 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 RHAGQ02094 409 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TNFRSF17Q02223 184 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 C2orf80Q0P641 193 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 KLF10Q13118 480 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 HEPACAMQ14CZ8 416 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 RPS6KA2Q15349 733 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 WLSQ5T9L3 541 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 NDUFAF5Q5TEU4 345 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 C18orf63Q68DL7 685 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TMEM132CQ8N3T6 1108 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 KRTCAP2Q8N6L1 136 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 GLB1L3Q8NCI6 653 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 NAXEQ8NCW5 288 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 CLHC1Q8NHS4 586 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 UCN3Q969E3 161 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TESCQ96BS2 214 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 PEX11GQ96HA9 241 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 SECISBP2Q96T21 854 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 CSF3RQ99062 836 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 DEFB126Q9BYW3 111 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TTTY12Q9BZ98 90 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 DPY30Q9C005 99 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 EXO5Q9H790 373 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 ZDHHC11Q9H8X9 412 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TIMMDC1Q9NPL8 285 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 TAS2R7Q9NYW3 318 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 ERVK-11Q9UQG0 969 aa12.75□□□□□ -0.37
SHKBP1-218ENST00000598907 ARID1AO14497 2285 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 C1orf226A1L170 272 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 CAPN14A8MX76 684 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 SCAMP2O15127 329 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 PGRMC2O15173 223 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 CNOT4O95628 575 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 CPN2P22792 545 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 RPL3P39023 403 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 MAGEA5P43359 124 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 NME5P56597 212 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 STX1BP61266 288 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 GABPB1Q06547 395 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 DMTNQ08495 405 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 PRSS53Q2L4Q9 553 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 FITM2Q8N6M3 262 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 PSD4Q8NDX1 1056 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 OR2M7Q8NG81 312 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 OR9I1Q8NGQ6 314 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 LRRC37BQ96QE4 947 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 OR1F2PQ96R84 312 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 FAIM2Q9BWQ8 316 aa12.74□□□□□ -0.37
SHKBP1-218ENST00000598907 LANCL2Q9NS86 450 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms