RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CIB1Q99828 191 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 NUDT9Q9BW91 350 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 ZNF350Q9GZX5 532 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 CALML5Q9NZT1 146 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 SH3GLB1Q9Y371 365 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 AK5Q9Y6K8 562 aa21.66■■□□□ 1.06
SYMPK-212ENST00000598896 PRKNO60260 465 aaPredicted RBP21.65■■□□□ 1.06
SYMPK-212ENST00000598896 DIRAS1O95057 198 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 PRSS23O95084 383 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 CST1P01037 141 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 HPCAP84074 193 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 PUM1Q14671 1186 aaKnown RBP eCLIP21.65■■□□□ 1.066e-6■■□□□ 13.7
SYMPK-212ENST00000598896 ZNHIT3Q15649 155 aaPredicted RBP21.65■■□□□ 1.06
SYMPK-212ENST00000598896 GRAMD1BQ3KR37 738 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 SFT2D3Q587I9 215 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 FIGNL1Q6PIW4 674 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 ZSCAN1Q8NBB4 408 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 RMND5BQ96G75 393 aaPredicted RBP21.65■■□□□ 1.06
SYMPK-212ENST00000598896 FOXJ2Q9P0K8 574 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 WDR45Q9Y484 360 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 PCDHGB3Q9Y5G1 929 aa21.65■■□□□ 1.06
SYMPK-212ENST00000598896 DEAF1O75398 565 aaPredicted RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 KLF7O75840 302 aaPredicted RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 FESP07332 822 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 HOXB6P17509 224 aaKnown RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 KCNJ5P48544 419 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 POU6F2P78424 691 aaPredicted RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 NCF4Q15080 339 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 TIPARPQ7Z3E1 657 aaKnown RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 EME1Q96AY2 570 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 SPRY4Q9C004 299 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 PRODH2Q9UF12 536 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 GPN3Q9UHW5 284 aaPredicted RBP21.64■■□□□ 1.06
SYMPK-212ENST00000598896 OAZ3Q9UMX2 235 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 PADI2Q9Y2J8 665 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 PCDHGA3Q9Y5H0 932 aa21.64■■□□□ 1.06
SYMPK-212ENST00000598896 CENPVL1A0A0U1RR11 272 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 SAC3D1A6NKF1 404 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 KCNK2O95069 426 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 DLGAP3O95886 979 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 EPPINO95925 133 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 IST1P53990 364 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 ZAR1Q86SH2 424 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 WDR36Q8NI36 951 aaKnown RBP21.64■■□□□ 1.05
SYMPK-212ENST00000598896 VPS50Q96JG6 964 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 WFDC6Q9BQY6 131 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 KLHL4Q9C0H6 718 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 DNAJB9Q9UBS3 223 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 NXT1Q9UKK6 140 aaKnown RBP21.64■■□□□ 1.05
SYMPK-212ENST00000598896 GVINP1Q7Z2Y8 2422 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 SDK2Q58EX2 2172 aa21.64■■□□□ 1.05
SYMPK-212ENST00000598896 SYNDIG1LA6NDD5 238 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 C9J4A7 227 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 TM4SF5O14894 197 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 GPR143P51810 404 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 TARDBPQ13148 414 aaKnown RBP eCLIP21.63■■□□□ 1.052e-7■■■■■ 39.9
SYMPK-212ENST00000598896 TMEM205Q6UW68 189 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 PIWIL3Q7Z3Z3 882 aaKnown RBP21.63■■□□□ 1.05
SYMPK-212ENST00000598896 MARCH9Q86YJ5 346 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 C9orf40Q8IXQ3 194 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 OR1N1Q8NGS0 311 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 METTL21AQ8WXB1 218 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 GEMIN6Q8WXD5 167 aaKnown RBP21.63■■□□□ 1.05
SYMPK-212ENST00000598896 C8orf44Q96CB5 159 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 SLC46A1Q96NT5 459 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 BTBD9Q96Q07 612 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 WDR77Q9BQA1 342 aaPredicted RBP21.63■■□□□ 1.05
SYMPK-212ENST00000598896 BDH2Q9BUT1 245 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 NDUFAF4Q9P032 175 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 BAG5Q9UL15 447 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 KNTC1P50748 2209 aa21.63■■□□□ 1.05
SYMPK-212ENST00000598896 STX11O75558 287 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 AK1P00568 194 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 IGKV1D-16P01601 117 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 UMODP07911 640 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 PABPC4LP0CB38 370 aaKnown RBP21.62■■□□□ 1.05
SYMPK-212ENST00000598896 CSRP1P21291 193 aaKnown RBP21.62■■□□□ 1.05
SYMPK-212ENST00000598896 IZUMO2Q6UXV1 221 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 VRK2Q86Y07 508 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 RASSF5Q8WWW0 418 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 ART5Q96L15 291 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 ZNF354BQ96LW1 612 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 SAP130Q9H0E3 1048 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 VNN3Q9NY84 501 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 GPR55Q9Y2T6 319 aaPredicted RBP21.62■■□□□ 1.05
SYMPK-212ENST00000598896 SAGE2PA6NJ88 616 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 PDLIM1O00151 329 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 PEX1O43933 1283 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 BRINP1O60477 761 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 ALPPP05187 535 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 TRHRP34981 398 aaPredicted RBP21.62■■□□□ 1.05
SYMPK-212ENST00000598896 PPP1R8Q12972 351 aaKnown RBP21.62■■□□□ 1.05
SYMPK-212ENST00000598896 GPR68Q15743 365 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 MORN4Q8NDC4 146 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 OR4D11Q8NGI4 311 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 TMBIM1Q969X1 311 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 SLC29A1Q99808 456 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 SPATA5L1Q9BVQ7 753 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 AMBRA1Q9C0C7 1298 aa21.62■■□□□ 1.05
SYMPK-212ENST00000598896 COQ10BQ9H8M1 238 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms