RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 WISP2O76076 250 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 GPIP06744 558 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 HSD17B1P14061 328 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ATP6V1B1P15313 513 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 NME2P22392 152 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 TACR1P25103 407 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 MST1P26927 711 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 TTKP33981 857 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 TRHRP34981 398 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ALDH3B2P48448 385 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 MRPL19P49406 292 aaKnown RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 SLC37A1P57057 533 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ELOAQ14241 798 aaKnown RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 HEPACAMQ14CZ8 416 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 PRSS53Q2L4Q9 553 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 UGT3A2Q3SY77 523 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 GALNT18Q6P9A2 607 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 PAOXQ6QHF9 649 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 TMEM64Q6YI46 380 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ZBTB49Q6ZSB9 765 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 LARP4Q71RC2 724 aaKnown RBP eCLIP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 MIER2Q8N344 545 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 LRRC25Q8N386 305 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 METTL25Q8N6Q8 603 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 RNF148Q8N7C7 305 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 BCORP1Q8N888 145 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 CLHC1Q8NHS4 586 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 C11orf24Q96F05 449 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 C9orf16Q9BUW7 83 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ANKRA2Q9H9E1 313 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 MIEF1Q9NQG6 463 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 HPF1Q9NWY4 346 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 C1orf109Q9NX04 203 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 MAT2BQ9NZL9 334 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 CCDC167Q9P0B6 97 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 PSME2Q9UL46 239 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 GMEB1Q9Y692 573 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 SPTA1P02549 2419 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 SPENQ96T58 3664 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 C2orf92A0A1B0GVN3 265 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 FBP2O00757 339 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 AKAP10O43572 662 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 NME6O75414 186 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 LRATO95237 230 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 UMPSP11172 480 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 DRD2P14416 443 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 PSMA4P25789 261 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 GALNSP34059 522 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 MSX2P35548 267 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 MEOX1P50221 254 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 NR0B1P51843 470 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 NME5P56597 212 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 KIAA0040Q15053 153 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 EBPQ15125 230 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 INAQ16352 499 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 NNATQ16517 81 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 PRICKLE4Q2TBC4 344 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 TRMT12Q53H54 448 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 HLA-DQA1Q5Y7H0 255 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 LCN8Q6JVE9 175 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 ANKRD26P1Q6NSI1 321 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 SPATA19Q7Z5L4 167 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 SULF2Q8IWU5 870 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 VWA5B2Q8N398 1253 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 OR9A2Q8NGT5 310 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 OR8K3Q8NH51 312 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 ZFP28Q8NHY6 868 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 KAT2AQ92830 837 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 C3orf30Q96M34 536 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 ZNF681Q96N22 645 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 TSSK3Q96PN8 268 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 BARD1Q99728 777 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 YTHDF1Q9BYJ9 559 aaKnown RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 WWTR1Q9GZV5 400 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 OR10A5Q9H207 317 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 MYNNQ9NPC7 610 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 CCM2LQ9NUG4 571 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-209ENST00000598895 SIRT5Q9NXA8 310 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 ABCD2Q9UBJ2 740 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 ENTPD4Q9Y227 616 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 DTX4Q9Y2E6 619 aa11.15□□□□□ -0.62
ZNF548-209ENST00000598895 PRORSD1PA6NEY8 169 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 LSM1O15116 133 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 ZNHIT1O43257 154 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 NADKO95544 446 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 CRYABP02511 175 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 ATP1B1P05026 303 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 IDO1P14902 403 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 PCSK2P16519 638 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 LBPP18428 481 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms