RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	DNAJB8	Q8NHS0	232 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	SPACA9	Q96E40	222 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	OR52E6	Q96RD3	313 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	CXorf36	Q9H7Y0	433 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	POMP	Q9Y244	141 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	PCDHGA10	Q9Y5H3	936 aa		18.55	■□□□□ 0.56
IRF3-221	ENST00000598808	FRG2C	A6NGY1	282 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808		G3V3Y1	287 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	RNASET2	O00584	256 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	PSMG1	O95456	288 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	NADK	O95544	446 aa	Predicted RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	PGR	P06401	933 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	RFX3	P48380	749 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	TMED10	P49755	219 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	MLLT10	P55197	1068 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	HBA1	P69905	142 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	TIGD2	Q4W5G0	525 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	PRR30	Q53SZ7	412 aa	Predicted RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	RTL4	Q6ZR62	310 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	GALNTL5	Q7Z4T8	443 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	DPP10	Q8N608	796 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808		Q8NA96	180 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC9A6	Q92581	669 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	FAM120B	Q96EK7	910 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	VSTM2L	Q96N03	204 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	YIPF4	Q9BSR8	244 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	SIRT3	Q9NTG7	399 aa	Predicted RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	FAM120C	Q9NX05	1096 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	STX18	Q9P2W9	335 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	STOML1	Q9UBI4	398 aa		18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	SUCO	Q9UBS9	1254 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-221	ENST00000598808	RNF103-CHMP3	A0A140T963	221 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	PRSS51	A0A1B0GVH4	220 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	SP1	P08047	785 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	CD1E	P15812	388 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	CAPN3	P20807	821 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	ABCD3	P28288	659 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	GCK	P35557	465 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	PPIC	P45877	212 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	CCT3	P49368	545 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	WNT3	P56703	355 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	FBXW4	P57775	412 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	GPR85	P60893	370 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	TRAP1	Q12931	704 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	VPS26B	Q4G0F5	336 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	MDGA2	Q7Z553	956 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	CISD2	Q8N5K1	135 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	FAM98A	Q8NCA5	519 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	C17orf47	Q8NEP4	570 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	OR56A1	Q8NGH5	318 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	OMA1	Q96E52	524 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	OTUB1	Q96FW1	271 aa	Predicted RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	ANKRD27	Q96NW4	1050 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	BTBD9	Q96Q07	612 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	GPATCH1	Q9BRR8	931 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	TMEM181	Q9P2C4	612 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	NPFFR2	Q9Y5X5	522 aa		18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	SPEN	Q96T58	3664 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-221	ENST00000598808	CDK2AP1	O14519	115 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	ACOX3	O15254	700 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	SORBS2	O94875	1100 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	RASAL1	O95294	804 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808		P04436	131 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	IL6	P05231	212 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	FBXO45	P0C2W1	286 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	DRD5	P21918	477 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	IL12B	P29460	328 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	ZFP36L2	P47974	494 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	PMP22	Q01453	160 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	LASP1	Q14847	261 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	FAM180A	Q6UWF9	173 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	ANGPTL8	Q6UXH0	198 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	NPSR1	Q6W5P4	371 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	SLC34A3	Q8N130	599 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	CLEC4F	Q8N1N0	589 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	PSD4	Q8NDX1	1056 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	OR10G3	Q8NGC4	313 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	GPR151	Q8TDV0	419 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	TMBIM1	Q969X1	311 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	HSPBAP1	Q96EW2	488 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	PANX1	Q96RD7	426 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808		Q9N2J8	555 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	ABCD2	Q9UBJ2	740 aa		18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	GPR55	Q9Y2T6	319 aa	Predicted RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	KLF13	Q9Y2Y9	288 aa	Predicted RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	GCN1	Q92616	2671 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-221	ENST00000598808	TP53I11	O14683	189 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	SUV39H1	O43463	412 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	NME2P1	O60361	137 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	REM1	O75628	298 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	PDE5A	O76074	875 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	NME2	P22392	152 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	CHI3L1	P36222	383 aa	Predicted RBP	18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	PRIM2	P49643	509 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	PHC1	P78364	1004 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	BHLHB9	Q6PI77	547 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	MSANTD1	Q6ZTZ1	278 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	RETREG3	Q86VR2	466 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	DND1	Q8IYX4	353 aa	Known RBP	18.52	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms