RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CELA3AP09093 270 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 POLR2JP52435 117 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 KCNK10P57789 538 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 HSF1Q00613 529 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 ALDH6A1Q02252 535 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 TP53BP2Q13625 1128 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 EIF2S3LQ2VIR3 472 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 CYP27C1Q4G0S4 372 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 CMPK2Q5EBM0 449 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 ANXA8L1Q5VT79 327 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 MIER2Q8N344 545 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 TMEM251Q8N6I4 163 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 CDRT4Q8N9R6 151 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 GLB1L3Q8NCI6 653 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 GPR151Q8TDV0 419 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 RILPQ96NA2 401 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 COL21A1Q96P44 957 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 OR52E6Q96RD3 313 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 TMEM120AQ9BXJ8 343 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 TTTY12Q9BZ98 90 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 GALNT9Q9HCQ5 603 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 FAM120CQ9NX05 1096 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 BTNL2Q9UIR0 455 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 OR10H1Q9Y4A9 318 aa13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-217ENST00000598558 CROCCQ5TZA2 2017 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 CAPN14A8MX76 684 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 TP53I11O14683 189 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 ICOSLGO75144 302 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 KCNK2O95069 426 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 IL33O95760 270 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 EDN3P14138 238 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 PTPN6P29350 595 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 SOAT1P35610 550 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 PNLIPRP2P54317 469 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 GAS1P54826 345 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 PPIAP62937 165 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 MRPS22P82650 360 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 PRR5P85299 388 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 DPY19L1Q2PZI1 675 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 SPDYE7PQ495Y7 208 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 GTDC1Q4AE62 458 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 CCNJQ5T5M9 372 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 FIGNL1Q6PIW4 674 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 APOOLQ6UXV4 268 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 OLIG3Q7RTU3 272 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 OR56A1Q8NGH5 318 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 OR5D16Q8NGK9 328 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 SFXN5Q8TD22 340 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 CDS1Q92903 461 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 RMND5BQ96G75 393 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 ZBTB18Q99592 522 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 DEFB127Q9H1M4 99 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 IL1RL2Q9HB29 575 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 NEUROD4Q9HD90 331 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 Q9N2J8 555 aa13.01□□□□□ -0.33
SHKBP1-217ENST00000598558 RNF103-CHMP3A0A140T963 221 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 FAM234BA2RU67 622 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 PRAMEF27A3QJZ7 478 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ANKUB1A6NFN9 424 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 CCDC154A6NI56 674 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ASNA1O43681 348 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 FADS1O60427 444 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 PDE9AO76083 593 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 UNC5CO95185 931 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 IL6P05231 212 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ALOX5P09917 674 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ZNF24P17028 368 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 NCF2P19878 526 aaPredicted RBP13□□□□□ -0.33
SHKBP1-217ENST00000598558 CAPN3P20807 821 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 UQCRC2P22695 453 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 MAGEA5P43359 124 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 RFX3P48380 749 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 PRIM2P49643 509 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 TMED10P49755 219 aaKnown RBP13□□□□□ -0.33
SHKBP1-217ENST00000598558 SEC24CP53992 1094 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ZNHIT3Q15649 155 aaPredicted RBP13□□□□□ -0.33
SHKBP1-217ENST00000598558 HYAL4Q2M3T9 481 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 TIGD2Q4W5G0 525 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 SAXO2Q658L1 398 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 CDC73Q6P1J9 531 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 TMEM81Q6P7N7 255 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 ZCCHC12Q6PEW1 402 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 BLOC1S3Q6QNY0 202 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 POGLUT1Q8NBL1 392 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 FAM98AQ8NCA5 519 aaKnown RBP13□□□□□ -0.33
SHKBP1-217ENST00000598558 ST6GALNAC3Q8NDV1 305 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 OR4C3Q8NH37 302 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 GTF2H4Q92759 462 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 GPR137Q96N19 417 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 GNRHR2Q96P88 292 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 OR7D2Q96RA2 312 aa13□□□□□ -0.33
SHKBP1-217ENST00000598558 DOHHQ9BU89 302 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms