RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ACP2P11117 423 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 MRPL19P49406 292 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 IRX1P78414 480 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 MRPS22P82650 360 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 LRRC74AQ0VAA2 488 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 EFR3AQ14156 821 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 SQLEQ14534 574 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 TBCELQ5QJ74 424 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 ZFP62Q8NB50 900 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 GALNT11Q8NCW6 608 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 HGDQ93099 445 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 EFHD2Q96C19 240 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC35A4Q96G79 324 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 C16orf58Q96GQ5 468 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 CCDC115Q96NT0 180 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 ADOQ96SZ5 270 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 BARD1Q99728 777 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 ACTRT3Q9BYD9 372 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 METTL7AQ9H8H3 244 aa18.06■□□□□ 0.48
SHKBP1-214ENST00000597396 GTF3C1Q12789 2109 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 GXYLT2A0PJZ3 443 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 PINLYPA6NC86 204 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 CYSRT1A8MQ03 144 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ACOT7O00154 380 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 TFECO14948 347 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 TSPAN2O60636 221 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 KCNH1O95259 989 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 UQCRC2P22695 453 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 RFX3P48380 749 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ATP4BP51164 291 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ARFIP2P53365 341 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 PNLIPRP2P54317 469 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 PSMD4P55036 377 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 SF3A3Q12874 501 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ELOAQ14241 798 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ZNF324BQ6AW86 544 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 DESI1Q6ICB0 168 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 CDC73Q6P1J9 531 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 COX18Q8N8Q8 333 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC16A11Q8NCK7 471 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 PIK3R3Q92569 461 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 HOXB13Q92826 284 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 TMCO6Q96DC7 493 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 OTUB1Q96FW1 271 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 RMND5BQ96G75 393 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC35G5Q96KT7 338 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 PANX1Q96RD7 426 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 NODALQ96S42 347 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 SLX1AQ9BQ83 275 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 DOHHQ9BU89 302 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 TSPAN10Q9H1Z9 355 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 RMND5AQ9H871 391 aa18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 TUBA8Q9NY65 449 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 BOKQ9UMX3 212 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 UBR5O95071 2799 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-214ENST00000597396 ANKRD33BA6NCL7 494 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 HS6ST1O60243 411 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 EDN3P14138 238 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 MST1P26927 711 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 CHI3L1P36222 383 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 MAP3K8P41279 467 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 ZFP36L2P47974 494 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 KCNK10P57789 538 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 DUSP5Q16690 384 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 TIGD2Q4W5G0 525 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 BICRALQ6AI39 1079 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 CGB2Q6NT52 195 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 MSANTD1Q6ZTZ1 278 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 C6orf120Q7Z4R8 191 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 CLEC4FQ8N1N0 589 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 TRIML2Q8N7C3 387 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 ADAMTS15Q8TE58 950 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 JSRP1Q96MG2 331 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 STACQ99469 402 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 INPP5KQ9BT40 448 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 OSBPL11Q9BXB4 747 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 GPATCH2Q9NW75 528 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 KLRF1Q9NZS2 232 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 CCDC167Q9P0B6 97 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 DNAJC13O75165 2243 aa18.04■□□□□ 0.48
SHKBP1-214ENST00000597396 ZNF407Q9C0G0 2248 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 PRAMEF25A6NGN4 478 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 NPIPA5E9PKD4 350 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 RFXANKO14593 260 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 IL33O95760 270 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 CYP4B1P13584 511 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 CASP3P42574 277 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 MASP1P48740 699 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 TDGF1P3P51864 188 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 PPIAP62937 165 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 POU6F2P78424 691 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 AGKQ53H12 422 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 RNFT1Q5M7Z0 435 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 ZNF621Q6ZSS3 439 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC22A16Q86VW1 577 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 ST6GALNAC3Q8NDV1 305 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 GOT1L1Q8NHS2 421 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 ITCHQ96J02 903 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 ZNF597Q96LX8 424 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms