RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CA7P43166 264 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 ZFP36L2P47974 494 aaKnown RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 PRKAG1P54619 331 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 GAS1P54826 345 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 HBA1P69905 142 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 DUSP5Q16690 384 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 BNC2Q6ZN30 1099 aaPredicted RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 Q6ZPB1 254 aaPredicted RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 TRILQ7L0X0 811 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 FJX1Q86VR8 437 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 SLC22A16Q86VW1 577 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 DOLPP1Q86YN1 238 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 LRRC34Q8IZ02 419 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 GHDCQ8N2G8 530 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 FAM109AQ8N4B1 249 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 WDSUB1Q8N9V3 476 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 SLC16A11Q8NCK7 471 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 ZFP28Q8NHY6 868 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 PIWIL2Q8TC59 973 aaKnown RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 CKAP2Q8WWK9 683 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 OR5P2Q8WZ92 322 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 MARK4Q96L34 752 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 JSRP1Q96MG2 331 aaPredicted RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 C7orf26Q96N11 449 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 GNRHR2Q96P88 292 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 PSMG3-AS1Q96PY0 264 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 PCNX1Q96RV3 2341 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 YIPF4Q9BSR8 244 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 UBQLN3Q9H347 655 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 ZNF703Q9H7S9 590 aaPredicted RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 GPATCH2Q9NW75 528 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 FBXO34Q9NWN3 711 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 TNFRSF10DQ9UBN6 386 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 SH3BGRL2Q9UJC5 107 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 USH1CQ9Y6N9 552 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 MED12Q93074 2177 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 A0A1B0GVC2 190 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 PRAMEF25A6NGN4 478 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 TRPC5OSA6NMA1 111 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 GNB5O14775 395 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 FADS1O60427 444 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SNX4O95219 450 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 HMGN2P05204 90 aaKnown RBP10.19□□□□□ -0.78
VRK3-210ENST00000596121 PTPN6P29350 595 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 RPL3P39023 403 aaKnown RBP10.19□□□□□ -0.78
VRK3-210ENST00000596121 MAN2A2P49641 1150 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 TMED10P49755 219 aaKnown RBP10.19□□□□□ -0.78
VRK3-210ENST00000596121 DGKQP52824 942 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 PNLIPRP2P54317 469 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 LSM12Q3MHD2 195 aaKnown RBP10.19□□□□□ -0.78
VRK3-210ENST00000596121 CYP27C1Q4G0S4 372 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SPANXN4Q5MJ08 99 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 TMEM81Q6P7N7 255 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 EPGNQ6UW88 154 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 APOOLQ6UXV4 268 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 C3P1Q6ZMU1 363 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 RGS9BPQ6ZS82 235 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SPATA19Q7Z5L4 167 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 ZAR1Q86SH2 424 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 GALNT10Q86SR1 603 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 KIRREL3Q8IZU9 778 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 OR8J2Q8NGG1 315 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 LRRC8CQ8TDW0 803 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 ACTRT2Q8TDY3 377 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SSC4DQ8WTU2 575 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 TMEM41AQ96HV5 264 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 MS4A4EQ96PG1 132 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 EBF4Q9BQW3 602 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 DPY30Q9C005 99 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SLC6A15Q9H2J7 730 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 SERHL2Q9H4I8 314 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
VRK3-210ENST00000596121 SPRR3Q9UBC9 169 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 CBLCQ9ULV8 474 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 C15orf41Q9Y2V0 281 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 OR10H1Q9Y4A9 318 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 KCNE3Q9Y6H6 103 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 FREM3P0C091 2139 aa10.19□□□□□ -0.78
VRK3-210ENST00000596121 UQCRHLA0A096LP55 91 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 SLCO1B7G3V0H7 640 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 ZG16O60844 167 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 IL33O95760 270 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 CD1EP15812 388 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 PTGS2P35354 604 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 TRPC1P48995 793 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 CCT3P49368 545 aaKnown RBP10.18□□□□□ -0.78
VRK3-210ENST00000596121 IDH3AP50213 366 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 MRPS22P82650 360 aaKnown RBP10.18□□□□□ -0.78
VRK3-210ENST00000596121 SLC10A1Q14973 349 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 TBCELQ5QJ74 424 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 TIGD3Q6B0B8 471 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 NXNQ6DKJ4 435 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 SLC30A6Q6NXT4 461 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 ANGPTL8Q6UXH0 198 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 ANKRD46Q86W74 232 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 RPRMLQ8N4K4 120 aa10.18□□□□□ -0.78
VRK3-210ENST00000596121 GOLGA6L1Q8N7Z2 621 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms