RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 NPHS2Q9NP85 383 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 DUSP22Q9NRW4 184 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 FAF1Q9UNN5 650 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-204ENST00000594806 TRIM33Q9UPN9 1127 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 TFECO14948 347 aaPredicted RBP23.64■■□□□ 1.37
TRIM28-204ENST00000594806 UGT2B11O75310 529 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 GLSO94925 669 aaPredicted RBP23.64■■□□□ 1.37
TRIM28-204ENST00000594806 DNASE1L1P49184 302 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 FOXO1Q12778 655 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 PRAMEF20Q5VT98 475 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 CDC73Q6P1J9 531 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 PACS2Q86VP3 889 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 OR4N2Q8NGD1 307 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 SLC9A6Q92581 669 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 MARK4Q96L34 752 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 ADOQ96SZ5 270 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 TTTY12Q9BZ98 90 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 METTL7AQ9H8H3 244 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 SEC14L3Q9UDX4 400 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 PCDHGB3Q9Y5G1 929 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 POLEQ07864 2286 aa23.64■■□□□ 1.37
TRIM28-204ENST00000594806 FAM234BA2RU67 622 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 HS6ST1O60243 411 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 IL33O95760 270 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 VIMP08670 466 aaKnown RBP23.63■■□□□ 1.37
TRIM28-204ENST00000594806 UQCRC2P22695 453 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 LCN1P31025 176 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 POLR2JP52435 117 aaKnown RBP23.63■■□□□ 1.37
TRIM28-204ENST00000594806 PPIAP62937 165 aaKnown RBP23.63■■□□□ 1.37
TRIM28-204ENST00000594806 TP53BP2Q13625 1128 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 LASP1Q14847 261 aaKnown RBP23.63■■□□□ 1.37
TRIM28-204ENST00000594806 RNFT1Q5M7Z0 435 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 METTL21CQ5VZV1 264 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 TRIML2Q8N7C3 387 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 SLC16A11Q8NCK7 471 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 NTNG2Q96CW9 530 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 TMEM41AQ96HV5 264 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 RILPQ96NA2 401 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 PIGUQ9H490 435 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 RABEP2Q9H5N1 569 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 ZFP64Q9NPA5 681 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 GPATCH2Q9NW75 528 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 TUBA8Q9NY65 449 aaPredicted RBP23.63■■□□□ 1.37
TRIM28-204ENST00000594806 DCTN4Q9UJW0 460 aa23.63■■□□□ 1.37
TRIM28-204ENST00000594806 A0A0G2JMM0 328 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 A0A1W2PPB8 328 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 A0A1W2PRS3 328 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 PINLYPA6NC86 204 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 KIR3DP1A8MWS1 328 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 NPIPA5E9PKD4 350 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 G3V3Y1 287 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ASNA1O43681 348 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 TRIM3O75382 744 aaPredicted RBP23.62■■□□□ 1.37
TRIM28-204ENST00000594806 CPSF4O95639 269 aaKnown RBP23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ACP2P11117 423 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 SOAT1P35610 550 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 DGKQP52824 942 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 KCNC4Q03721 635 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 RBPJQ06330 500 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.62■■□□□ 1.372e-9■□□□□ 11
TRIM28-204ENST00000594806 PAOXQ6QHF9 649 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 GFRALQ6UXV0 394 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 WDR53Q7Z5U6 358 aaPredicted RBP23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ANKRD46Q86W74 232 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ADAMTS15Q8TE58 950 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 C16orf58Q96GQ5 468 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 ZNF597Q96LX8 424 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 NODALQ96S42 347 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 RMND5AQ9H871 391 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 MRGBPQ9NV56 204 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 QPCTLQ9NXS2 382 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 B4GALT7Q9UBV7 327 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 NPIPA1Q9UND3 350 aa23.62■■□□□ 1.37
TRIM28-204ENST00000594806 DUXAA6NLW8 204 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 GNLYP22749 145 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 SQLEQ14534 574 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 DUSP5Q16690 384 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 C6orf120Q7Z4R8 191 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 GHDCQ8N2G8 530 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 FAM109AQ8N4B1 249 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 RFWD2Q8NHY2 731 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 RNF138Q8WVD3 245 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 JADE3Q92613 823 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 EFHD2Q96C19 240 aaPredicted RBP23.61■■□□□ 1.37
TRIM28-204ENST00000594806 PANX1Q96RD7 426 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 BTBD2Q9BX70 525 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 OSBPL11Q9BXB4 747 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 ZDHHC11Q9H8X9 412 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 FGFR1OP2Q9NVK5 253 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 KLRF1Q9NZS2 232 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 ABCG2Q9UNQ0 655 aa23.61■■□□□ 1.37
TRIM28-204ENST00000594806 A0A0G2JND7 137 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 RNF103-CHMP3A0A140T963 221 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 PRAMEF25A6NGN4 478 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 ELAVL4P26378 380 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 ZFP36L2P47974 494 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 MASP1P48740 699 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 TXNL4AP83876 142 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 COX18Q8N8Q8 333 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 OR5AK3PQ8NH89 298 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms