RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, human

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-204	ENST00000594552	ADGRG4	Q8IZF6	3080 aa		11.92	□□□□□ -0.5
CAPN12-204	ENST00000594552		A0A0G2JNJ9	132 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	HSPB2	A8KAH6	182 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	MYO1G	B0I1T2	1018 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	DVL2	O14641	736 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	KLF11	O14901	512 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	SNN	O75324	88 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	BCAS2	O75934	225 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	RFPL3S	P0C7P2	107 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	BCKDHA	P12694	445 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ENDOU	P21128	410 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	S1PR1	P21453	382 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	GPX3	P22352	226 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	RPL3	P39023	403 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PEX19	P40855	299 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	NCBP2	P52298	156 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PSPH	P78330	225 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	GUCA2A	Q02747	115 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	TFF3	Q07654	80 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PLCXD2	Q0VAA5	305 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	MAD2L1	Q13257	205 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PDE7A	Q13946	482 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	LTB4R	Q15722	352 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	HSPB2	Q16082	182 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PDCD2	Q16342	344 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	C6orf136	Q5SQH8	315 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	FAM180B	Q6P0A1	224 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	LYPD8	Q6UX82	237 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	TMEM64	Q6YI46	380 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ULK2	Q8IYT8	1036 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	CCDC116	Q8IYX3	515 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	FNDC5	Q8NAU1	212 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ADCY4	Q8NFM4	1077 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ZFP28	Q8NHY6	868 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	SPPL2A	Q8TCT8	520 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ARL8A	Q96BM9	186 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	PPCDC	Q96CD2	204 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	EGLN2	Q96KS0	407 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	C3orf30	Q96M34	536 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	TSSK3	Q96PN8	268 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	SECISBP2	Q96T21	854 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	TREX2	Q9BQ50	279 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	C20orf27	Q9GZN8	174 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ACKR4	Q9NPB9	350 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	ASIC5	Q9NY37	505 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	NOP53	Q9NZM5	478 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	KLRF1	Q9NZS2	232 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552		Q9UFV3	132 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	EXO1	Q9UQ84	846 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	CAMK2A	Q9UQM7	478 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552	HCFC1	P51610	2035 aa		11.91	□□□□□ -0.5
CAPN12-204	ENST00000594552		A0A087WV62	115 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ANKRD33B	A6NCL7	494 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	SCAMP2	O15127	329 aa	Known RBP	11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ACOX3	O15254	700 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PDPK1	O15530	556 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PLOD3	O60568	738 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PEX11A	O75192	247 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	COQ9	O75208	318 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	CBX7	O95931	251 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	JUN	P05412	331 aa	Known RBP	11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PRPS2	P11908	318 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PCSK2	P16519	638 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	IGFBP2	P18065	325 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	UQCRC1	P31930	480 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	KRT20	P35900	424 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	KRTAP10-9	P60411	292 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	DCAF7	P61962	342 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	MRPS35	P82673	323 aa	Known RBP	11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	DUSP8	Q13202	625 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	TTMP	Q5BVD1	217 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	FBXW10	Q5XX13	1052 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	FAM111B	Q6SJ93	734 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ACBD4	Q8NC06	268 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	OR52R1	Q8NGF1	315 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ADIPOR1	Q96A54	375 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	AMDHD1	Q96NU7	426 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	OSBPL11	Q9BXB4	747 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	ACBD3	Q9H3P7	528 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	MANSC1	Q9H8J5	431 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	EIF3L	Q9Y262	564 aa	Known RBP	11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	C15orf41	Q9Y2V0	281 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	PCDHGB3	Q9Y5G1	929 aa		11.9	□□□□□ -0.5
CAPN12-204	ENST00000594552	FRG2C	A6NGY1	282 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	SLCO1B7	G3V0H7	640 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	GNB5	O14775	395 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	IL2RA	P01589	272 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	CD1E	P15812	388 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	PRPS1L1	P21108	318 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	BMP5	P22003	454 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	ABCD3	P28288	659 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	SOX18	P35713	384 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	FRK	P42685	505 aa	Predicted RBP	11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	C21orf58	P58505	322 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	EMX2	Q04743	252 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	RCAN2	Q14206	197 aa		11.89	□□□□□ -0.51
CAPN12-204	ENST00000594552	EXOSC7	Q15024	291 aa	Known RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms