RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 FAM83FQ8NEG4 500 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-203ENST00000593582 OR4N2Q8NGD1 307 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 PPP1R14CQ8TAE6 165 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 EFHD2Q96C19 240 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-203ENST00000593582 DTNBP1Q96EV8 351 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-203ENST00000593582 PPP3R2Q96LZ3 170 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 UCK2Q9BZX2 261 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 Q9N2J8 555 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 SERHLQ9NQF3 203 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
TRIM28-203ENST00000593582 A0A0G2JNJ9 132 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 NKX2-6A6NCS4 301 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 TBX19O60806 448 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 PSMG1O95456 288 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 BCKDHAP12694 445 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ETV4P43268 484 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 SERPINB4P48594 390 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 MANFP55145 182 aaKnown RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 DECR1Q16698 335 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ATP6AP1LQ52LC2 224 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 WIPI1Q5MNZ9 446 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 RIPPLY2Q5TAB7 128 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 MEX3BQ6ZN04 569 aaKnown RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ZNF551Q7Z340 670 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 R3HCC1LQ7Z5L2 792 aaKnown RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 YRDCQ86U90 279 aaKnown RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 PLCZ1Q86YW0 608 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ABTB1Q969K4 478 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 CIDECQ96AQ7 238 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 MTERF3Q96E29 417 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 PRDM14Q9GZV8 571 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ENKD1Q9H0I2 346 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 CENPHQ9H3R5 247 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 Q9UFV3 132 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 ZDHHC2Q9UIJ5 367 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 MRTO4Q9UKD2 239 aaKnown RBP13.92□□□□□ -0.18
TRIM28-203ENST00000593582 CBLCQ9ULV8 474 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 CAMK2AQ9UQM7 478 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 APCP25054 2843 aa13.92□□□□□ -0.18
TRIM28-203ENST00000593582 FBN2P35556 2912 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 EXPH5Q8NEV8 1989 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 TTC36A6NLP5 189 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 PEX11AO75192 247 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 TOXO94900 526 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 ACTL6AO96019 429 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 BMP7P18075 431 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 ARRB2P32121 409 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 EVI2BP34910 448 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 HPCAL1P37235 193 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 ADH7P40394 386 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 PSMD4P55036 377 aaKnown RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 TFF3Q07654 80 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 GAB1Q13480 694 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 PDE7AQ13946 482 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 ACSF3Q4G176 576 aaPredicted RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 XKR7Q5GH72 579 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 CEP85LQ5SZL2 805 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 WDR53Q7Z5U6 358 aaPredicted RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 OR6Y1Q8NGX8 325 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 OR14L1PQ8NHC6 308 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 LMF2Q9BU23 707 aaKnown RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 UGT2B28Q9BY64 529 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 TRIM8Q9BZR9 551 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 C3orf14Q9HBI5 128 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 SSU72Q9NP77 194 aaKnown RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
TRIM28-203ENST00000593582 TAS2R10Q9NYW0 307 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 CSMD2Q7Z408 3487 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 NCKAP5O14513 1909 aa13.91□□□□□ -0.18
TRIM28-203ENST00000593582 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 WDR91A4D1P6 747 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 HSPB2A8KAH6 182 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 TM9SF1O15321 606 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 BIRC5O15392 142 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 KCNH1O95259 989 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 HSPA4LO95757 839 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 EPPINO95925 133 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 PRPS2P11908 318 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 CYP4B1P13584 511 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 GRK2P25098 689 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 MSX1P28360 303 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 SSTR2P30874 369 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 RPL3P39023 403 aaKnown RBP13.9□□□□□ -0.18
TRIM28-203ENST00000593582 FRKP42685 505 aaPredicted RBP13.9□□□□□ -0.18
TRIM28-203ENST00000593582 HSPB2Q16082 182 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 VPS26BQ4G0F5 336 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 ZNF385BQ569K4 471 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 OR5M10Q6IEU7 315 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 CROCCP2Q86T23 111 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 EXOC3L1Q86VI1 746 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 IFNEQ86WN2 208 aa13.9□□□□□ -0.18
TRIM28-203ENST00000593582 LACC1Q8IV20 430 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms