RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TNFSF13O75888 250 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 GRK2P25098 689 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 IL12BP29460 328 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 PNLIPRP2P54317 469 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 GAS1P54826 345 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 DIO3P55073 304 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 ACSM2AQ08AH3 577 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 HEPACAMQ14CZ8 416 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 BCL2A1Q16548 175 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 ACSM2BQ68CK6 577 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 GRAMD2AQ8IUY3 354 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 WFDC11Q8NEX6 87 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 METTL6Q8TCB7 284 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 SHCBP1LQ9BZQ2 653 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 SLC35C2Q9NQQ7 365 aa21.67■■□□□ 1.06
LSM4-202ENST00000593564 DLX3O60479 287 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 ZIC3O60481 467 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 URI1O94763 535 aaPredicted RBP21.66■■□□□ 1.06
LSM4-202ENST00000593564 DPP4P27487 766 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 HMOX2P30519 316 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 MRPS22P82650 360 aaKnown RBP21.66■■□□□ 1.06
LSM4-202ENST00000593564 POU4F3Q15319 338 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 LGSNQ5TDP6 509 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 OR5M10Q6IEU7 315 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 GALNT18Q6P9A2 607 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 TIFABQ6ZNK6 161 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 LCA5Q86VQ0 697 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 FAM9CQ8IZT9 166 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 C16orf78Q8WTQ4 265 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 MTBPQ96DY7 904 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 C11orf24Q96F05 449 aaPredicted RBP21.66■■□□□ 1.06
LSM4-202ENST00000593564 APIPQ96GX9 242 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 STMN4Q9H169 189 aaPredicted RBP21.66■■□□□ 1.06
LSM4-202ENST00000593564 NEUROD4Q9HD90 331 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 TAS2R9Q9NYW1 312 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 TMEM216Q9P0N5 145 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 NFU1Q9UMS0 254 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 STK38LQ9Y2H1 464 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 ABCA2Q9BZC7 2435 aa21.66■■□□□ 1.06
LSM4-202ENST00000593564 MED12LQ86YW9 2145 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 A0A1W2PNV4 684 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 A0A1W2PPR1 153 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 B4DXG7 233 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 CD53P19397 219 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 IMPDH1P20839 514 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 HOXC12P31275 282 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 TIA1P31483 386 aaKnown RBP eCLIP21.65■■□□□ 1.06
LSM4-202ENST00000593564 MPIP34949 423 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 HTR6P50406 440 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 B3GALT5-AS1P59052 145 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 SLC44A2Q8IWA5 706 aaPredicted RBP21.65■■□□□ 1.06
LSM4-202ENST00000593564 NOA1Q8NC60 698 aaKnown RBP21.65■■□□□ 1.06
LSM4-202ENST00000593564 OR7G2Q8NG99 324 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 BEX4Q9NWD9 120 aaPredicted RBP21.65■■□□□ 1.06
LSM4-202ENST00000593564 SENP1Q9P0U3 644 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 NDRG3Q9UGV2 375 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 TESMINQ9Y4I5 508 aa21.65■■□□□ 1.06
LSM4-202ENST00000593564 EXOC1LA0A1B0GW35 172 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 MSTNO14793 375 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 CASKO14936 926 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 TGM6O95932 706 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 ENO1P06733 434 aaKnown RBP21.64■■□□□ 1.05
LSM4-202ENST00000593564 CRHP06850 196 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 CTAGE8P0CG41 777 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 ATP5F1P24539 256 aaPredicted RBP21.64■■□□□ 1.05
LSM4-202ENST00000593564 GSTM5P46439 218 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 PCYT1AP49585 367 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 DSCR4P56555 118 aaPredicted RBP21.64■■□□□ 1.05
LSM4-202ENST00000593564 LCP2Q13094 533 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 CTAGE4Q8IX94 777 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 OR4K17Q8NGC6 315 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 OR4N2Q8NGD1 307 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 EFHD2Q96C19 240 aaPredicted RBP21.64■■□□□ 1.05
LSM4-202ENST00000593564 OR10H1Q9Y4A9 318 aa21.64■■□□□ 1.05
LSM4-202ENST00000593564 CCDC151A5D8V7 595 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 TCEA1P23193 301 aaKnown RBP21.63■■□□□ 1.05
LSM4-202ENST00000593564 GCAP28676 217 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 EVI2BP34910 448 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 PRKAA2P54646 552 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 PKNOX1P55347 436 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 OR2A2Q6IF42 318 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 P4HA3Q7Z4N8 544 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 BIVMQ86UB2 503 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 SLC22A9Q8IVM8 553 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 FADS6Q8N9I5 356 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 EBPLQ9BY08 206 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 SIRT5Q9NXA8 310 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 PPP4R1LQ9P1A2 415 aa21.63■■□□□ 1.05
LSM4-202ENST00000593564 EIF3LQ9Y262 564 aaKnown RBP21.63■■□□□ 1.05
LSM4-202ENST00000593564 SERTM1A2A2V5 107 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 C17orf51A8MQB3 221 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 COQ9O75208 318 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 SLITRK5O94991 958 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 ABHD2P08910 425 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 PEPDP12955 493 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 CPOXP36551 454 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 PSG6Q00889 435 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 ZNF155Q12901 538 aaPredicted RBP21.62■■□□□ 1.05
LSM4-202ENST00000593564 CHMP1BQ7LBR1 199 aa21.62■■□□□ 1.05
LSM4-202ENST00000593564 KRTAP1-3Q8IUG1 177 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms