RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
H3F3B-213ENST00000593254 BBS4Q96RK4 519 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 SMR3AQ99954 134 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 POLDIP3Q9BY77 421 aaKnown RBP12.03□□□□□ -0.48
H3F3B-213ENST00000593254 PRDM14Q9GZV8 571 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-213ENST00000593254 FOLH1BQ9HBA9 442 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 GALNT9Q9HCQ5 603 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 MKS1Q9NXB0 559 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 KLRF1Q9NZS2 232 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 MID2Q9UJV3 735 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 EXO1Q9UQ84 846 aaKnown RBP12.03□□□□□ -0.48
H3F3B-213ENST00000593254 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
H3F3B-213ENST00000593254 POLR3HQ9Y535 204 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-213ENST00000593254 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.48
H3F3B-213ENST00000593254 A0A087WV62 115 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 TSPAN2O60636 221 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 NME6O75414 186 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 SLITRK5O94991 958 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 EPPINO95925 133 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 NUDT17P0C025 328 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 BMP7P18075 431 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 DNASE1P24855 282 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 KIAA0040Q15053 153 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 SLC25A35Q3KQZ1 300 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 EIPR1Q53HC9 387 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 WIPI1Q5MNZ9 446 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 CLEC6AQ6EIG7 209 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 NOXRED1Q6NXP6 359 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 IKBIPQ70UQ0 350 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 Q71RC1 249 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 RIBC1Q8N443 379 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 OR2W6PQ8NHA6 318 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 TMCO6Q96DC7 493 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 ARSGQ96EG1 525 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 RMND5BQ96G75 393 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 COL21A1Q96P44 957 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 UGT2B28Q9BY64 529 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 CLEC4MQ9H2X3 399 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-213ENST00000593254 MIEF1Q9NQG6 463 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 RASSF1Q9NS23 344 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 TAS2R9Q9NYW1 312 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 SENP1Q9P0U3 644 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 SLC6A5Q9Y345 797 aa12.02□□□□□ -0.49
H3F3B-213ENST00000593254 KDM4EB2RXH2 506 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 AZIN1O14977 448 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 TRIM13O60858 407 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 REM1O75628 298 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 PSMG1O95456 288 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 JUNP05412 331 aaKnown RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 CEACAM8P31997 349 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 TIMP3P35625 211 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 NCBP2P52298 156 aaKnown RBP eCLIP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 VSNL1P62760 191 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 PSG6Q00889 435 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 EFR3AQ14156 821 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 TOMM20Q15388 145 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 DCST1Q5T197 706 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 RNF165Q6ZSG1 346 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 LACC1Q8IV20 430 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 ZZZ3Q8IYH5 903 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 BANPQ8N9N5 519 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 WDSUB1Q8N9V3 476 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 NAXEQ8NCW5 288 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 ABTB1Q969K4 478 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 APOPT1Q96IL0 206 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 ADOQ96SZ5 270 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 GATA5Q9BWX5 397 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 OR2B2Q9GZK3 357 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 SERHLQ9NQF3 203 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 C19orf53Q9UNZ5 99 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-213ENST00000593254 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 WIF1Q9Y5W5 379 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
H3F3B-213ENST00000593254 TLDC2A0PJX2 215 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 HSPB2A8KAH6 182 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 KIAA1324LA8MWY0 1029 aaPredicted RBP12□□□□□ -0.49
H3F3B-213ENST00000593254 SLC28A1O00337 649 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 PLOD2O00469 737 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 COQ9O75208 318 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 SEC22BO75396 215 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 CBR3O75828 277 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 ACTL6AO96019 429 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 TACR1P25103 407 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 IL12BP29460 328 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 NTSP30990 170 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 MC3RP41968 323 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 PNLIPRP2P54317 469 aa12□□□□□ -0.49
H3F3B-213ENST00000593254 ZNF155Q12901 538 aaPredicted RBP12□□□□□ -0.49
H3F3B-213ENST00000593254 SF3B4Q15427 424 aaKnown RBP eCLIP12□□□□□ -0.491e-11■■■■□ 21.3
H3F3B-213ENST00000593254 HSPB2Q16082 182 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms