RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	NODAL	Q96S42	347 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	STAC	Q99469	402 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	FAM173A	Q9BQD7	235 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	INPP5K	Q9BT40	448 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	ANGPTL4	Q9BY76	406 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	PIGU	Q9H490	435 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621		Q9N2J8	555 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	DUSP22	Q9NRW4	184 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	KLHL14	Q9P2G3	628 aa		10.72	□□□□□ -0.69
RANBP3-228	ENST00000592621	RNF103-CHMP3	A0A140T963	221 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	LRRC3C	A6NJW4	275 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TRIM3	O75382	744 aa	Predicted RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	REM1	O75628	298 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	CPSF4	O95639	269 aa	Known RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	IL33	O95760	270 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	CRYAB	P02511	175 aa	Known RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	HOXB9	P17482	250 aa	Predicted RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	PTPN6	P29350	595 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	GABRA3	P34903	492 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	SOAT1	P35610	550 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	DNASE1L1	P49184	302 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	ARFIP2	P53365	341 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	MRPS22	P82650	360 aa	Known RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TP53BP2	Q13625	1128 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TIGD2	Q4W5G0	525 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TBCEL	Q5QJ74	424 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	PRAMEF20	Q5VT98	475 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	FNDC7	Q5VTL7	733 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	SZRD1	Q7Z422	152 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	C6orf120	Q7Z4R8	191 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	FBXO30	Q8TB52	745 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	MIPOL1	Q8TD10	442 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	C10orf82	Q8WW14	230 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	SLC9A6	Q92581	669 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	GTF2H4	Q92759	462 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	VPS33A	Q96AX1	596 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	EFHD2	Q96C19	240 aa	Predicted RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	NEURL3	Q96EH8	262 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	OTUB1	Q96FW1	271 aa	Predicted RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	CHMP6	Q96FZ7	201 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	RILP	Q96NA2	401 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	PHF12	Q96QT6	1004 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	PANX1	Q96RD7	426 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	ADO	Q96SZ5	270 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	YIPF4	Q9BSR8	244 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	ACTRT3	Q9BYD9	372 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	AGPAT4	Q9NRZ5	378 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	SLC6A13	Q9NSD5	602 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	OLAH	Q9NV23	265 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TUBA8	Q9NY65	449 aa	Predicted RBP	10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	CCDC167	Q9P0B6	97 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	PCDHGB4	Q9UN71	923 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	TRIM33	Q9UPN9	1127 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	OR10H1	Q9Y4A9	318 aa		10.71	□□□□□ -0.69
RANBP3-228	ENST00000592621	CCDC154	A6NI56	674 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	KCNK2	O95069	426 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	CBX6	O95503	412 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	ALOX5	P09917	674 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	ZCCHC18	P0CG32	403 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	CYP4B1	P13584	511 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	EDN3	P14138	238 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	NCF2	P19878	526 aa	Predicted RBP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	CAPN3	P20807	821 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	IL12B	P29460	328 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	LSP1	P33241	339 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	RFC3	P40938	356 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SEC24C	P53992	1094 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	GAS1	P54826	345 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	RPP38	P78345	283 aa	Known RBP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.7	□□□□□ -0.7	1e-6	■■■■■ 48.1
RANBP3-228	ENST00000592621	SNTA1	Q13424	505 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	EFR3A	Q14156	821 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	DECR1	Q16698	335 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SPDYE7P	Q495Y7	208 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	BHLHB9	Q6PI77	547 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	GK5	Q6ZS86	529 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	GALNT11	Q8NCW6	608 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	ST6GALNAC3	Q8NDV1	305 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	OR5D16	Q8NGK9	328 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	GPR151	Q8TDV0	419 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	CDS1	Q92903	461 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	TMCO6	Q96DC7	493 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SPDL1	Q96EA4	605 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	RMND5B	Q96G75	393 aa	Predicted RBP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	OR7D2	Q96RA2	312 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SLC35A5	Q9BS91	424 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	TTTY12	Q9BZ98	90 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	PAIP1	Q9H074	479 aa	Known RBP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	IL1RL2	Q9HB29	575 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	FLRT3	Q9NZU0	649 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	HRH3	Q9Y5N1	445 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	KCNE3	Q9Y6H6	103 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	ZNF462	Q96JM2	2506 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	SHANK1	Q9Y566	2161 aa		10.7	□□□□□ -0.7
RANBP3-228	ENST00000592621	PRAMEF25	A6NGN4	478 aa		10.69	□□□□□ -0.7
RANBP3-228	ENST00000592621		B4DXG7	233 aa		10.69	□□□□□ -0.7
RANBP3-228	ENST00000592621	PYCARD-AS1	I3L0S3	204 aa		10.69	□□□□□ -0.7
RANBP3-228	ENST00000592621		J3QKU1	62 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms