RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LRIF1Q5T3J3 769 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 C11orf88Q6PI97 169 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 KLHDC8BQ8IXV7 354 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 PAPD5Q8NDF8 572 aaKnown RBP13.72□□□□□ -0.21
RETREG3-208ENST00000589797 AP3S1Q92572 193 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 MRGPRX1Q96LB2 322 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 BEX2Q9BXY8 128 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 BEX1Q9HBH7 125 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 TMEM45AQ9NWC5 275 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
RETREG3-208ENST00000589797 NBASA2RRP1 2371 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 YY2O15391 372 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 CDC40O60508 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 FCMRO60667 390 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 OPN1LWP04000 364 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 CXCR1P25024 350 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 QPRTQ15274 297 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 NKAIN2Q5VXU1 208 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ALKBH2Q6NS38 261 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 PRSS48Q7RTY5 328 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 CENPMQ9NSP4 180 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 A0A1W2PRG6 482 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 SEMA3DO95025 777 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 RCBTB2O95199 551 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 UGT2B7P16662 529 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 GGT2P36268 569 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ADARB1P78563 741 aaKnown RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 TRMT12Q53H54 448 aaKnown RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ALG10BQ5I7T1 473 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 OR2T33Q8NG76 320 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 C9orf43Q8TAL5 461 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 FANK1Q8TC84 345 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 SLC37A2Q8TED4 501 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 GGHQ92820 318 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 NKD1Q969G9 470 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 MND1Q9BWT6 205 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 PROM1O43490 865 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 JRKO75564 520 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 UBXN7O94888 489 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 MTNR1AP48039 350 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 PPP2R2BQ00005 443 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 DECR1Q16698 335 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 PROKR2Q8NFJ6 384 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 RSC1A1Q92681 617 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 SLC41A3Q96GZ6 507 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 CDCA3Q99618 268 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-208ENST00000589797 TIMM29Q9BSF4 260 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 ACOT13Q9NPJ3 140 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 MAN2B2Q9Y2E5 1009 aa13.71□□□□□ -0.21
RETREG3-208ENST00000589797 IGLV3-16A0A075B6K0 115 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 LOC105369274A0A096LPK9 316 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 LOC102723532A0A0G2JNH3 316 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 ADAP00813 363 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 CEACAM5P06731 702 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 CDKN3Q16667 212 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.22
RETREG3-208ENST00000589797 OR4N4Q8N0Y3 316 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 OR2A1Q8NGT9 310 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 THEM6Q8WUY1 208 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 CRELD1Q96HD1 420 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 CDADC1Q9BWV3 514 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 TRIM2Q9C040 744 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 TCEAL2Q9H3H9 227 aaPredicted RBP13.71□□□□□ -0.22
RETREG3-208ENST00000589797 RNF167Q9H6Y7 350 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 MED20Q9H944 212 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 CD93Q9NPY3 652 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 ZSCAN32Q9NX65 697 aa13.71□□□□□ -0.22
RETREG3-208ENST00000589797 DHCR7Q9UBM7 475 aaKnown RBP13.71□□□□□ -0.22
RETREG3-208ENST00000589797 PRAMEF26H0Y7S4 382 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 CHST10O43529 356 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 HYAL3O43820 417 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-208ENST00000589797 AGR2O95994 175 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 PLGP00747 810 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-208ENST00000589797 MYF5P13349 255 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 SSTR4P31391 388 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 XCR1P46094 333 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 RABIFP47224 123 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 ISL1P61371 349 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 OR2L8Q8NGY9 312 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 OCEL1Q9H607 264 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-208ENST00000589797 RMI1Q9H9A7 625 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 GNG8Q9UK08 70 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 ZFR2Q9UPR6 939 aaKnown RBP13.7□□□□□ -0.22
RETREG3-208ENST00000589797 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 PTHP01270 115 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 ZNF3P17036 446 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 GIPRP48546 466 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 CAV3P56539 151 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 TFF2Q03403 129 aa13.7□□□□□ -0.22
RETREG3-208ENST00000589797 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms