RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ZNF611Q8N823 705 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 KAT2AQ92830 837 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 TMCO6Q96DC7 493 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 RNF122Q9H9V4 155 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 RYDENQ9NUL5 291 aaKnown RBP13.55□□□□□ -0.24
SF3A2-204ENST00000589118 GPR55Q9Y2T6 319 aaPredicted RBP13.55□□□□□ -0.24
SF3A2-204ENST00000589118 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 PCDHA9Q9Y5H5 950 aa13.55□□□□□ -0.24
SF3A2-204ENST00000589118 OR6C70A6NIJ9 312 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 OR7A17O14581 309 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 ACOX3O15254 700 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 RAD51CO43502 376 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CD5LO43866 347 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 ADAM11O75078 769 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 TP53P04637 393 aaPredicted RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CT45A8P0DMV1 189 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CT45A9P0DMV2 189 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 PEPDP12955 493 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 PTNP21246 168 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 ARL1P40616 181 aaPredicted RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 PCYT1AP49585 367 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 ARFIP1P53367 373 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 PHEXP78562 749 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 STX5Q13190 355 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 SLMAPQ14BN4 828 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 TSC22D1Q15714 1073 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 BCL2A1Q16548 175 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 KRTAP24-1Q3LI83 254 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CT45A2Q5DJT8 189 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 RAET1LQ5VY80 246 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 SLC48A1Q6P1K1 146 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 SCIMPQ6UWF3 145 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 STAC2Q6ZMT1 411 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 LARP4Q71RC2 724 aaKnown RBP eCLIP13.54□□□□□ -0.248e-9■□□□□ 8.5
SF3A2-204ENST00000589118 CTAGE3PQ8IX95 158 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 OR2M3Q8NG83 312 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 OR4K17Q8NGC6 315 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 OR52B6Q8NGF0 335 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 KLHL29Q96CT2 875 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CNRIP1Q96F85 164 aaPredicted RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 CPNE1Q99829 537 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 NMRAL1Q9HBL8 299 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 SAYSD1Q9NPB0 183 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 FARSBQ9NSD9 589 aaKnown RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 TXNDC16Q9P2K2 825 aa13.54□□□□□ -0.24
SF3A2-204ENST00000589118 GDF2Q9UK05 429 aaPredicted RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 YLPM1P49750 1951 aaKnown RBP13.54□□□□□ -0.24
SF3A2-204ENST00000589118 TCRBV9S1A1TA0A576 114 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 FOXE1O00358 373 aaPredicted RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 TO15178 435 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 IFNA2P01563 188 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 ATP1B1P05026 303 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 LTA4HP09960 611 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 GFAPP14136 432 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 GP5P40197 560 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 ALDH9A1P49189 494 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 RPS4XP62701 263 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 CKAP4Q07065 602 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 FAPQ12884 760 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 GUSBP1Q15486 140 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 L3MBTL4Q8NA19 623 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 REPS1Q96D71 796 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 SLC35A4Q96G79 324 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 TMEM204Q9BSN7 226 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 SLCO5A1Q9H2Y9 848 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 NOL11Q9H8H0 719 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 FOLH1BQ9HBA9 442 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 CFL2Q9Y281 166 aa13.53□□□□□ -0.24
SF3A2-204ENST00000589118 MRPS18CQ9Y3D5 142 aaKnown RBP13.53□□□□□ -0.24
SF3A2-204ENST00000589118 OR2M5A3KFT3 312 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 OVOL3O00110 214 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 TNFRSF21O75509 655 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 IGHV4-39P01824 125 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 MAPK12P53778 367 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 DSCR4P56555 118 aaPredicted RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 OCRLQ01968 901 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 CAV1Q03135 178 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 CYS1Q717R9 158 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 FAM214BQ7L5A3 538 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 TBC1D1Q86TI0 1168 aaPredicted RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 FADS6Q8N9I5 356 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms