RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CD79BP40259 229 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 KIR2DL2P43627 348 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-204ENST00000588687 RAE1P78406 368 aaKnown RBP16.63■□□□□ 0.25
CCDC43-204ENST00000588687 TCHHL1Q5QJ38 904 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-204ENST00000588687 PRSS57Q6UWY2 283 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 C22orf34Q6ZV56 151 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-204ENST00000588687 BTLAQ7Z6A9 289 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 OR9A2Q8NGT5 310 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 SELENOMQ8WWX9 145 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 FIG4Q92562 907 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 Q96MF0 132 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 PIGQQ9BRB3 760 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 GRPEL1Q9HAV7 217 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 NINJ2Q9NZG7 142 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 DKKL1Q9UK85 242 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 HEATR5AQ86XA9 2040 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 MXRA5Q9NR99 2828 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 A8MT66 165 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 KIAA1324LA8MWY0 1029 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-204ENST00000588687 H0YC42 278 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 CASKO14936 926 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 ARHGEF9O43307 516 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 SMPD2O60906 423 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 OTCP00480 354 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 CHN1P15882 459 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 TSPAN8P19075 237 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 TCEA1P23193 301 aaKnown RBP16.62■□□□□ 0.25
CCDC43-204ENST00000588687 DPP4P27487 766 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 UGT2B10P36537 528 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 ALDH9A1P49189 494 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 CDH13P55290 713 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 TPD52P55327 224 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-204ENST00000588687 OR4N2Q8NGD1 307 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 KAT2AQ92830 837 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 PIGTQ969N2 578 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 C11orf24Q96F05 449 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-204ENST00000588687 MDFIQ99750 246 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 FAIM2Q9BWQ8 316 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 OPN3Q9H1Y3 402 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-204ENST00000588687 FOLH1BQ9HBA9 442 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 TRPS1Q9UHF7 1281 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 MCM8Q9UJA3 840 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 PSME2Q9UL46 239 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 ZNF780BQ9Y6R6 833 aa16.62■□□□□ 0.25
CCDC43-204ENST00000588687 TRIM64A6NGJ6 449 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 TRIM64BA6NI03 449 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 SLC22A20A6NK97 555 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 SMNDC1O75940 238 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC43-204ENST00000588687 IL3P08700 152 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 EFR3AQ14156 821 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 ACKR1Q16570 336 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 OR2A2Q6IF42 318 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 LARP4Q71RC2 724 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC43-204ENST00000588687 P3H2Q8IVL5 708 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 CCDC116Q8IYX3 515 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 OR7G2Q8NG99 324 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 EFHD2Q96C19 240 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-204ENST00000588687 PIK3IP1Q96FE7 263 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 RTN4RQ9BZR6 473 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 RNF122Q9H9V4 155 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 SNX6Q9UNH7 406 aa16.61■□□□□ 0.25
CCDC43-204ENST00000588687 PLOD3O60568 738 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 SMIM24O75264 130 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 BCAS2O75934 225 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 OR4F21O95013 312 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 EVI2BP34910 448 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 SUCLG1P53597 346 aaKnown RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 PNLIPRP2P54317 469 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 DSCR4P56555 118 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 PSPHP78330 225 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 PSG6Q00889 435 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 TSNAXIP1Q2TAA8 658 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 ZNF550Q7Z398 422 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 RELL1Q8IUW5 271 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 CNEP1R1Q8N9A8 125 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 OR2M3Q8NG83 312 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 NUDT8Q8WV74 236 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 PGM2Q96G03 612 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 CCL19Q99731 98 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 MRPL57Q9BQC6 102 aaKnown RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 ACPTQ9BZG2 426 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 MRPL46Q9H2W6 279 aaKnown RBP16.6■□□□□ 0.25
CCDC43-204ENST00000588687 UBTD1Q9HAC8 227 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 ZNF226Q9NYT6 803 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 FLRT3Q9NZU0 649 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 VPS29Q9UBQ0 182 aa16.6■□□□□ 0.25
CCDC43-204ENST00000588687 SONP18583 2426 aaKnown RBP16.59■□□□□ 0.25
CCDC43-204ENST00000588687 MANBAO00462 879 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 EMC8O43402 210 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 FADS1O60427 444 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 CD8BP10966 210 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 COL6A2P12110 1019 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 PEPDP12955 493 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 HSD3B1P14060 373 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 HSD3B2P26439 372 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 IL12BP29460 328 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 SLC7A5Q01650 507 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 CSTF3Q12996 717 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms