RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CXCR6O00574 342 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PDPK1O15530 556 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 P2RX6O15547 441 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 SLC19A2O60779 497 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 DEAF1O75398 565 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 SEC24DO94855 1032 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 RASAL1O95294 804 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 IFNA14P01570 189 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 IL3P08700 152 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PIM1P11309 404 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 BMP2P12643 396 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 TPP2P29144 1249 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 PTPN6P29350 595 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 NTSP30990 170 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 BSGP35613 385 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 EMP2P54851 167 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 WNT3P56703 355 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ARF3P61204 181 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 PCOLCEQ15113 449 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZC3H12BQ5HYM0 836 aaKnown RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 ADNP2Q6IQ32 1131 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 RPUSD3Q6P087 351 aaKnown RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 FBXO42Q6P3S6 717 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 CYP2R1Q6VVX0 501 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZNF621Q6ZSS3 439 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 LANCL3Q6ZV70 420 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ABHD13Q7L211 337 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 NDUFAF7Q7L592 441 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PRSS41Q7RTY9 318 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ASPGQ86U10 573 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PAQR7Q86WK9 346 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 CALHM3Q86XJ0 350 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PDSS2Q86YH6 399 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PLD3Q8IV08 490 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 RNF175Q8N4F7 328 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZNF808Q8N4W9 903 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 AMER3Q8N944 861 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 FAM47BQ8NA70 645 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 PAPD5Q8NDF8 572 aaKnown RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZNF740Q8NDX6 193 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 OR4A15Q8NGL6 344 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 OR10A6Q8NH74 314 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ADAMTS18Q8TE60 1221 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 CREB3L4Q8TEY5 395 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 OR5P2Q8WZ92 322 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 HAS2Q92819 552 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 GFM2Q969S9 779 aaKnown RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 SDCCAG3Q96C92 435 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZNF583Q96ND8 569 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 SIGLEC12Q96PQ1 595 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 ZFYVE21Q9BQ24 234 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 MACROD1Q9BQ69 325 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 C9orf16Q9BUW7 83 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 OSBPL10Q9BXB5 764 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 SPNS1Q9H2V7 528 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 TPT1P8Q9HAU6 139 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 MS4A12Q9NXJ0 267 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 SLAMF8Q9P0V8 285 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 NXT1Q9UKK6 140 aaKnown RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 PSME2Q9UL46 239 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 KLF2Q9Y5W3 355 aaPredicted RBP7.28□□□□□ -1.24
VMP1-204ENST00000587259 MED13LQ71F56 2210 aa7.28□□□□□ -1.24
VMP1-204ENST00000587259 IGKV1-8A0A0C4DH67 115 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 A0A1W2PRB8 838 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 HAT1O14929 419 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ERI3O43414 337 aaKnown RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 SCN2BO60939 215 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 SLITRK5O94991 958 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 BMP10O95393 424 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 CPSF4O95639 269 aaKnown RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 SERPINA7P05543 415 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 SERPIND1P05546 499 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 HEXBP07686 556 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 LAMP1P11279 417 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 HIST1H1TP22492 207 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 UQCRC2P22695 453 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 PEX2P28328 305 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 TLX1P31314 330 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 PTGER4P35408 488 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 MSX2P35548 267 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 CHI3L1P36222 383 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 BCL6P41182 706 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 BUD31P41223 144 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 FRKP42685 505 aaPredicted RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 PHC1P78364 1004 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 TESK1Q15569 626 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 VMACQ2NL98 169 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 PRTGQ2VWP7 1150 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 TOR1AIP1Q5JTV8 583 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 TCTE1Q5JU00 501 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ABHD17CQ6PCB6 329 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 RNF44Q7L0R7 432 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ANKRD46Q86W74 232 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ZC3H7AQ8IWR0 971 aaKnown RBP7.27□□□□□ -1.25
VMP1-204ENST00000587259 MSRB3Q8IXL7 192 aa7.27□□□□□ -1.25
VMP1-204ENST00000587259 ADGRG5Q8IZF4 528 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms