RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RAB8BQ92930 207 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 TMBIM1Q969X1 311 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 OMA1Q96E52 524 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
VMP1-203ENST00000586245 ABHD17AQ96GS6 310 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 SLC39A3Q9BRY0 314 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 BTBD2Q9BX70 525 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 RNF32Q9H0A6 362 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 ADNPQ9H2P0 1102 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 NANOGQ9H9S0 305 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 NDE1Q9NXR1 346 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 GMEB1Q9Y692 573 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
VMP1-203ENST00000586245 OR5H15A6NDH6 313 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 HS6ST1O60243 411 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 ZNF354AO60765 605 aaPredicted RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 ABCB7O75027 752 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 PPM1BO75688 479 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 UBOX5O94941 541 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 KCNK2O95069 426 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 FAM87AP0C7U9 286 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 GPX2P18283 190 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 ATP6V1C1P21283 382 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 RFX3P48380 749 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 CYB561P49447 251 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 ST13P50502 369 aaKnown RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 MVDP53602 400 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 DSTNP60981 165 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 RPP38P78345 283 aaKnown RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 TUBA3CQ13748 450 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 EFR3AQ14156 821 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 DCST2Q5T1A1 773 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 TUBA3EQ6PEY2 450 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 FIGNL1Q6PIW4 674 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 IGFL2Q6UWQ7 119 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 C16orf89Q6UX73 402 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 HPS6Q86YV9 775 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 CYP4Z2PQ8N1L4 340 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 ZADH2Q8N4Q0 377 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 OR4N2Q8NGD1 307 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 C9orf43Q8TAL5 461 aaPredicted RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 TTC9Q92623 222 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 HAS2Q92819 552 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 SPACA9Q96E40 222 aaPredicted RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 COL21A1Q96P44 957 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.56□□□□□ -0.4
VMP1-203ENST00000586245 ZBTB20Q9HC78 741 aaPredicted RBP12.56□□□□□ -0.4
VMP1-203ENST00000586245 ANKRD10Q9NXR5 420 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 PLA2G3Q9NZ20 509 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 P2RX2Q9UBL9 471 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 LIPT1Q9Y234 373 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 AP3M1Q9Y2T2 418 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 L3MBTL1Q9Y468 752 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 KCNE3Q9Y6H6 103 aa12.56□□□□□ -0.4
VMP1-203ENST00000586245 MAP1BP46821 2468 aaKnown RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 DOCK10Q96BY6 2186 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 B2RBV5 119 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 ERVH48-1M5A8F1 160 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 HMGN4O00479 90 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 TP53I11O14683 189 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 IL33O95760 270 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 F10P00742 488 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 CD96P40200 585 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 PSME3P61289 254 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 HPCAP84074 193 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 GNA13Q14344 377 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 NTRK2Q16620 822 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 CYP51A1Q16850 503 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 ZNF791Q3KP31 576 aaPredicted RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 ARHGAP11BQ3KRB8 267 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 GPAT3Q53EU6 434 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 GCNT6Q5T4J0 391 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 LYPD8Q6UX82 237 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 RTL4Q6ZR62 310 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 FAM13CQ8NE31 585 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 OR5M3Q8NGP4 307 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 DIO2Q92813 273 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 TMEM125Q96AQ2 219 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 ADOQ96SZ5 270 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 GPATCH1Q9BRR8 931 aaKnown RBP12.55□□□□□ -0.4
VMP1-203ENST00000586245 TRIM8Q9BZR9 551 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 IKZF5Q9H5V7 419 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 LRFN1Q9P244 771 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 TP53TG5Q9Y2B4 290 aa12.55□□□□□ -0.4
VMP1-203ENST00000586245 LOC400499M0QZD8 3231 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 OR6C70A6NIJ9 312 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 SLC28A2O43868 658 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 TSPAN2O60636 221 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 DPM1O60762 260 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 T-ENOLP0DO92 83 aa12.54□□□□□ -0.4
VMP1-203ENST00000586245 NR2F1P10589 423 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms