RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NT5EP21589 574 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 MMP11P24347 488 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 LCN1P31025 176 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 VHLP40337 213 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 MC3RP41968 323 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 MAGEA2P43356 314 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ID2Q02363 134 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 EEF1A2Q05639 463 aaKnown RBP11.75□□□□□ -0.53
VMP1-202ENST00000585847 MYBPC3Q14896 1274 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PCOLCEQ15113 449 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PRICKLE4Q2TBC4 344 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ZNF750Q32MQ0 723 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 MINDY4Q4G0A6 757 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 CRTC2Q53ET0 693 aaPredicted RBP11.75□□□□□ -0.53
VMP1-202ENST00000585847 AP1ARQ63HQ0 302 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 FAAH2Q6GMR7 532 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 TMEM107Q6UX40 140 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 CYP2R1Q6VVX0 501 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 DGAT2L6Q6ZPD8 337 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 CBLL1Q75N03 491 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ANKRD37Q7Z713 158 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 SPPL2CQ8IUH8 684 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ARMC8Q8IUR7 673 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PACRGLQ8N7B6 248 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ADCY4Q8NFM4 1077 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ADAMTS15Q8TE58 950 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PYDC1Q8WXC3 89 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 DAZLQ92904 295 aaKnown RBP11.75□□□□□ -0.53
VMP1-202ENST00000585847 RIT1Q92963 219 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 NACC2Q96BF6 587 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 C8orf44Q96CB5 159 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 BDH2Q9BUT1 245 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PIGUQ9H490 435 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 CXorf21Q9HAI6 301 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 CPNE5Q9HCH3 593 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 C19orf25Q9UFG5 118 aaPredicted RBP11.75□□□□□ -0.53
VMP1-202ENST00000585847 ZNF639Q9UID6 485 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 PADI2Q9Y2J8 665 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 IGHV3-20A0A0C4DH32 117 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 OR6C76A6NM76 312 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 H3BNX3 289 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 K7ENP7 123 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 HEXBP07686 556 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 TFPTP0C1Z6 253 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 COX6A1P12074 109 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 ETFAP13804 333 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 MATN1P21941 496 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 OTX2P32243 289 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 HSPA13P48723 471 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 DCAF7P61962 342 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 CDC20Q12834 499 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 EXOSC6Q5RKV6 272 aaKnown RBP11.74□□□□□ -0.53
VMP1-202ENST00000585847 FHL5Q5TD97 284 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 FAM180BQ6P0A1 224 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 INO80CQ6PI98 192 aaPredicted RBP11.74□□□□□ -0.53
VMP1-202ENST00000585847 PIWIL3Q7Z3Z3 882 aaKnown RBP11.74□□□□□ -0.53
VMP1-202ENST00000585847 SZRD1Q7Z422 152 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 MRGPREQ86SM8 312 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 OR5AK3PQ8NH89 298 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 CENPNQ96H22 339 aaPredicted RBP11.74□□□□□ -0.53
VMP1-202ENST00000585847 PYURFQ96I23 114 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 FBXL20Q96IG2 436 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 VPS50Q96JG6 964 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 ZNF347Q96SE7 839 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 ALOXE3Q9BYJ1 711 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
VMP1-202ENST00000585847 NUP214P35658 2090 aaPredicted RBP11.74□□□□□ -0.53
VMP1-202ENST00000585847 MGAQ8IWI9 3026 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 ATMQ13315 3056 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 IGHV1-45A0A0A0MS14 117 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 CDC14CA4D256 554 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 ZNF891A8MT65 544 aaPredicted RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 H0Y3Z8 333 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 HMGN4O00479 90 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 SERPINA1P01009 418 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 LDLRP01130 860 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 IGHEP01854 428 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 ALOX5P09917 674 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 C8orf89P0DMQ9 161 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 NR2F1P10589 423 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 PRKAR1AP10644 381 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 KCNC4Q03721 635 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 FUT7Q11130 342 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 ATP1A4Q13733 1029 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 LASP1Q14847 261 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 ATP6AP1Q15904 470 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 LRRC23Q53EV4 343 aaPredicted RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 MFSD4BQ5TF39 518 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 HEPHL1Q6MZM0 1159 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 LRRC74BQ6ZQY2 392 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 C16orf62Q7Z3J2 963 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 CPEB2Q7Z5Q1 589 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 MORN4Q8NDC4 146 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 CHDHQ8NE62 594 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms