RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PLOD3O60568 738 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 SMIM24O75264 130 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 SMNDC1O75940 238 aaKnown RBP eCLIP13.06□□□□□ -0.32
SDF2-202ENST00000585428 RPS17P08708 135 aaKnown RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 PEPDP12955 493 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 FPR1P21462 350 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 HSD17B3P37058 310 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 ALDH9A1P49189 494 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 SUCLG1P53597 346 aaKnown RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 PSPHP78330 225 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 UBAP2Q5T6F2 1119 aaKnown RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 FAM219BQ5XKK7 198 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 NPSR1Q6W5P4 371 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.32
SDF2-202ENST00000585428 RELL1Q8IUW5 271 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 GBP7Q8N8V2 638 aaPredicted RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 FADS6Q8N9I5 356 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 OR4N2Q8NGD1 307 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 PPP1R14CQ8TAE6 165 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 KAT2AQ92830 837 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 DTNBP1Q96EV8 351 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 Q96MF0 132 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 MDFIQ99750 246 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 MRPL57Q9BQC6 102 aaKnown RBP13.06□□□□□ -0.32
SDF2-202ENST00000585428 GRPEL1Q9HAV7 217 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 XPR1Q9UBH6 696 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
SDF2-202ENST00000585428 SLC22A20A6NK97 555 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 C17orf51A8MQB3 221 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 H7C1Q1 480 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 EMC8O43402 210 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 FADS1O60427 444 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 HSD3B1P14060 373 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 TSPAN8P19075 237 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 HSD3B2P26439 372 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 CPOXP36551 454 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 RAE1P78406 368 aaKnown RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 PSG6Q00889 435 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 TSNAXIP1Q2TAA8 658 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 ZNF572Q7Z3I7 529 aaPredicted RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 SAMD14Q8IZD0 417 aaPredicted RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 NUDT8Q8WV74 236 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 IGFBPL1Q8WX77 278 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 FIG4Q92562 907 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 PIK3IP1Q96FE7 263 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 FAM111AQ96PZ2 611 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 SLC39A3Q9BRY0 314 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 OPN3Q9H1Y3 402 aaPredicted RBP13.05□□□□□ -0.32
SDF2-202ENST00000585428 DSN1Q9H410 356 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 RNF122Q9H9V4 155 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 MCM8Q9UJA3 840 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 DKKL1Q9UK85 242 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 ZNF337Q9Y3M9 751 aa13.05□□□□□ -0.32
SDF2-202ENST00000585428 H0YC42 278 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 LINC01387J3KSC0 135 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 MANBAO00462 879 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 OR4F21O95013 312 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 CD8BP10966 210 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 CHN1P15882 459 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 CCKARP32238 428 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 PHBP35232 272 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
SDF2-202ENST00000585428 EEFSECP57772 596 aaKnown RBP13.04□□□□□ -0.32
SDF2-202ENST00000585428 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 OCRLQ01968 901 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 P4HA3Q7Z4N8 544 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 YTHDF3Q7Z739 585 aaKnown RBP13.04□□□□□ -0.32
SDF2-202ENST00000585428 SLC44A2Q8IWA5 706 aaPredicted RBP13.04□□□□□ -0.32
SDF2-202ENST00000585428 CNEP1R1Q8N9A8 125 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 OR2M3Q8NG83 312 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 OR7G2Q8NG99 324 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 OR9A2Q8NGT5 310 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 HBEGFQ99075 208 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 MED18Q9BUE0 208 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
SDF2-202ENST00000585428 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 TAS2R9Q9NYW1 312 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
SDF2-202ENST00000585428 FN1P02751 2386 aaKnown RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 A8MT66 165 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 IL3P08700 152 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 POU2F1P14859 743 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 PAX1P15863 534 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 IL12BP29460 328 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 MPIP34949 423 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 KRT20P35900 424 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 MRPS22P82650 360 aaKnown RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 CLCQ05315 142 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms