RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NDUFB2O95178 105 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 TFAP2AP05549 437 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 TNFSF8P32971 234 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 SOX3P41225 446 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 POU4F3Q15319 338 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 FAM205BPQ63HN1 556 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 LRRC28Q86X40 367 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 OR5M3Q8NGP4 307 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 OR4K13Q8NH42 304 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 METTL2AQ96IZ6 378 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 OR2M4Q96R27 311 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 SSX3Q99909 188 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 INPP5KQ9BT40 448 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 ACTRT3Q9BYD9 372 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 LOC105369274A0A096LPK9 316 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 TP53I11O14683 189 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 CASC3O15234 703 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 CLEC3AO75596 197 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 RPS17P08708 135 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 CHRNB1P11230 501 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 RNH1P13489 461 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 LETMD1Q6P1Q0 360 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 LEG1Q6P5S2 330 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 OR4N4Q8N0Y3 316 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 RPS10P5Q9NQ39 176 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 MYH8P13535 1937 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 KLK3P07288 261 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 UBBP0CG47 229 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 UBCP0CG48 685 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 GRPRP30550 384 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 CLDN10P78369 228 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 BCL2A1Q16548 175 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 UPP1Q16831 310 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 CPOQ8IVL8 374 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 TSTD1Q8NFU3 115 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 APIPQ96GX9 242 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 SAMD8Q96LT4 415 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 GJA1P17302 382 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 CCNOP22674 350 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 MLLT11Q13015 90 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 SPCS2Q15005 226 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 ZNF674Q2M3X9 581 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 MAMDC2Q7Z304 686 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 RASGRP3Q8IV61 690 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 FAM83FQ8NEG4 500 aaPredicted RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
RNF43-208ENST00000584437 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 HMGB4Q8WW32 186 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 MUL1Q969V5 352 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 SLC2A4RGQ9NR83 387 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 HRASLS2Q9NWW9 162 aa12.38□□□□□ -0.43
RNF43-208ENST00000584437 KCNJ13O60928 360 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 BDKRB2P30411 391 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 THBS2P35442 1172 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 SUOXP51687 545 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 RAP2BP61225 183 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 RPS27AP62979 156 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 TLE3Q04726 772 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 MRPL49Q13405 166 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 MEF2DQ14814 521 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 TATDN3Q17R31 274 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 IRF7Q92985 503 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PINK1Q9BXM7 581 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 C19orf12Q9NSK7 152 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 TMPRSS11EQ9UL52 423 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ZNF860A6NHJ4 632 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 GDI1P31150 447 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ETV6P41212 452 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PRPS1P60891 318 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 EOGTQ5NDL2 527 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 NPWQ8N729 165 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 MMABQ96EY8 250 aaPredicted RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 PGAP3Q96FM1 320 aaPredicted RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 HOXD1Q9GZZ0 328 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ZNF442Q9H7R0 627 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 SYNPO2LQ9H987 977 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 INPP5EQ9NRR6 644 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 VAPAQ9P0L0 249 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 YARS2Q9Y2Z4 477 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 SLC6A5Q9Y345 797 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 RNF215Q9Y6U7 377 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 DCNP07585 359 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 MLIPQ5VWP3 458 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 KDELC1Q6UW63 502 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms