RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DOHHQ9BU89 302 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 TMUB1Q9BVT8 246 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 POLDIP3Q9BY77 421 aaKnown RBP14.33□□□□□ -0.12
SKA2-209ENST00000583976 CXXC4Q9H2H0 198 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 CLEC4MQ9H2X3 399 aaPredicted RBP14.33□□□□□ -0.12
SKA2-209ENST00000583976 MIEF1Q9NQG6 463 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 ST6GALNAC2Q9UJ37 374 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 EIF3LQ9Y262 564 aaKnown RBP14.33□□□□□ -0.12
SKA2-209ENST00000583976 ZNF780BQ9Y6R6 833 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 C15orf38-AP3S2A0A0A6YYH1 394 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 TRPC5OSA6NMA1 111 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 SDHDO14521 159 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 PORP16435 677 aaPredicted RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 LBPP18428 481 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 DDCP20711 480 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 BMP5P22003 454 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 GSTM5P46439 218 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 SLC37A1P57057 533 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 FBXW4P57775 412 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 EMX2Q04743 252 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 DUSP2Q05923 314 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 CRYZQ08257 329 aaKnown RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 BIKQ13323 160 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 PRSS53Q2L4Q9 553 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 SPRED3Q2MJR0 410 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 DCST1Q5T197 706 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 NXNQ6DKJ4 435 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 ANKRD26P1Q6NSI1 321 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 SLC29A4Q7RTT9 530 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 MAVSQ7Z434 540 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 ST13P4Q8IZP2 240 aaPredicted RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 CNRIP1Q96F85 164 aaPredicted RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 THOC1Q96FV9 657 aaKnown RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 ART5Q96L15 291 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 ZNF597Q96LX8 424 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 FOXC2Q99958 501 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 EXO1Q9UQ84 846 aaKnown RBP14.32□□□□□ -0.12
SKA2-209ENST00000583976 USH1CQ9Y6N9 552 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 MED12Q93074 2177 aa14.32□□□□□ -0.12
SKA2-209ENST00000583976 DYRK3O43781 588 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 CT62P0C5K7 136 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 SLC35E2P0CK97 266 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 G6PDP11413 515 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 CD99P14209 185 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 CPMP14384 443 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 GABRA1P14867 456 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 NT5EP21589 574 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 KIR2DL3P43628 341 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 DIO3P55073 304 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 FOXD4Q12950 439 aaPredicted RBP14.31□□□□□ -0.12
SKA2-209ENST00000583976 DUSP8Q13202 625 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 MAD2L1Q13257 205 aaPredicted RBP14.31□□□□□ -0.12
SKA2-209ENST00000583976 PTGR1Q14914 329 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 NTRK2Q16620 822 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 IKBIPQ70UQ0 350 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 LARP4Q71RC2 724 aaKnown RBP eCLIP14.31□□□□□ -0.12
SKA2-209ENST00000583976 CCDC116Q8IYX3 515 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 PRR22Q8IZ63 422 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 ZNF441Q8N8Z8 693 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 NUDT8Q8WV74 236 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 RIT1Q92963 219 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 RMND5BQ96G75 393 aaPredicted RBP14.31□□□□□ -0.12
SKA2-209ENST00000583976 SLC35C2Q9NQQ7 365 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 NOP53Q9NZM5 478 aaKnown RBP14.31□□□□□ -0.12
SKA2-209ENST00000583976 B4GALT7Q9UBV7 327 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 CBLCQ9ULV8 474 aa14.31□□□□□ -0.12
SKA2-209ENST00000583976 ZNF195O14628 629 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 TRIM3O75382 744 aaPredicted RBP14.3□□□□□ -0.12
SKA2-209ENST00000583976 PRPS2P11908 318 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 CSNK2A2P19784 350 aaPredicted RBP14.3□□□□□ -0.12
SKA2-209ENST00000583976 ASMTP46597 345 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 ASCL1P50553 236 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 ZNF136P52737 540 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 NNATQ16517 81 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 FLYWCH1Q4VC44 716 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 FNDC7Q5VTL7 733 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 POMZP3Q6PJE2 187 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 CDC20BQ86Y33 519 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 TGIF2LYQ8IUE0 185 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 C7orf57Q8NEG2 295 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 ADCY4Q8NFM4 1077 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 DIO2Q92813 273 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 NINJ1Q92982 152 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 ZNF681Q96N22 645 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 RILPQ96NA2 401 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 BBS4Q96RK4 519 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 PELOQ9BRX2 385 aaKnown RBP14.3□□□□□ -0.12
SKA2-209ENST00000583976 BRINP2Q9C0B6 783 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 REEP4Q9H6H4 257 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 ACKR4Q9NPB9 350 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 RASSF1Q9NS23 344 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 GIMAP4Q9NUV9 329 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 CNIH4Q9P003 139 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 SH3BP4Q9P0V3 963 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 DTX4Q9Y2E6 619 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 WBP11Q9Y2W2 641 aaKnown RBP14.3□□□□□ -0.12
SKA2-209ENST00000583976 SLC6A5Q9Y345 797 aa14.3□□□□□ -0.12
SKA2-209ENST00000583976 NIPBLQ6KC79 2804 aaeCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms