RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CD1CP29017 333 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 GABRA3P34903 492 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 XCR1P46094 333 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 DAPP51397 102 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 UGT2B15P54855 530 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 NR1H2P55055 460 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 HSD17B7P56937 341 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 TAS2R41P59536 307 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PPP2R2BQ00005 443 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 MAT1AQ00266 395 aaKnown RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 MYBPC1Q00872 1141 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 INSM1Q01101 510 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 ACY1Q03154 408 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 KCNAB1Q14722 419 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 GPR68Q15743 365 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 MICAQ29983 383 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 EXOC3L2Q2M3D2 409 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 ARHGAP11BQ3KRB8 267 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 KCTD21Q4G0X4 260 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 TRMT12Q53H54 448 aaKnown RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 ZNF628Q5EBL2 1059 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 RBM48Q5RL73 367 aaKnown RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 MLIPQ5VWP3 458 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 TMEM71Q6P5X7 295 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 FAM111BQ6SJ93 734 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PRSS42Q7Z5A4 293 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 TMEM179BQ7Z7N9 219 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 METTL27Q8N6F8 245 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 ZNF675Q8TD23 568 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PMM1Q92871 262 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 CDS1Q92903 461 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 ANKRD9Q96BM1 317 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 MVB12AQ96EY5 273 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PTCHD1Q96NR3 888 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 MUS81Q96NY9 551 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 STACQ99469 402 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 RBCK1Q9BYM8 510 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 PIGUQ9H490 435 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 KRCC1Q9NPI7 259 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 TUBA8Q9NY65 449 aaPredicted RBP8.67□□□□□ -1.02
SS18-220ENST00000582092 NTMQ9P121 344 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 SNX5Q9Y5X3 404 aa8.67□□□□□ -1.02
SS18-220ENST00000582092 A0A1W2PS29 197 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SYNDIG1LA6NDD5 238 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 A8MVJ9 347 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SYT5O00445 386 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 FAAHO00519 579 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 RRP8O43159 456 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 HCRTR1O43613 425 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 FOXS1O43638 330 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 OR10H3O60404 316 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 PRAMEF2O60811 474 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 CDC123O75794 336 aaPredicted RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 CPNE6O95741 557 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 OXSR1O95747 527 aaPredicted RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 LGI1O95970 557 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 CHRM4P08173 479 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 GNAO1P09471 354 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 MYF5P13349 255 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 NELFEP18615 380 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 RFX3P48380 749 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 PGDP52209 483 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 RGS8P57771 180 aaPredicted RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 CHRNEQ04844 493 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 MAP4K2Q12851 820 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ERV3-1Q14264 604 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ZNF267Q14586 743 aaPredicted RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 EXOSC7Q15024 291 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 PRICKLE4Q2TBC4 344 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ARHGAP40Q5TG30 622 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 KDM4DQ6B0I6 523 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 GUSBP11Q6P575 273 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ISLR2Q6UXK2 745 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 LRRC69Q6ZNQ3 347 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 RBM44Q6ZP01 1051 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 D2HGDHQ8N465 521 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SLC16A11Q8NCK7 471 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 OR52R1Q8NGF1 315 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ART5Q96L15 291 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ZNF285Q96NJ3 590 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 FEVQ99581 238 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 CNPPD1Q9BV87 410 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 TEX12Q9BXU0 123 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 STRADBQ9C0K7 418 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SERHL2Q9H4I8 314 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 EVA1AQ9H8M9 152 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ANKRA2Q9H9E1 313 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 ZNF304Q9HCX3 659 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 POLE3Q9NRF9 147 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 DUSP22Q9NRW4 184 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 PNO1Q9NRX1 252 aaKnown RBP8.66□□□□□ -1.02
SS18-220ENST00000582092 VNN3Q9NY84 501 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 MAT2BQ9NZL9 334 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 PRODH2Q9UF12 536 aa8.66□□□□□ -1.02
SS18-220ENST00000582092 SRPK3Q9UPE1 567 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms