RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NSUN5P2Q63ZY6 315 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 ANGPTL8Q6UXH0 198 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 WDR53Q7Z5U6 358 aaPredicted RBP19.08■□□□□ 0.64
CCDC42-203ENST00000581598 SLC35A4Q96G79 324 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 UGT2B28Q9BY64 529 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 SLC35C2Q9NQQ7 365 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 GIMAP4Q9NUV9 329 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 ZNF629Q9UEG4 869 aaPredicted RBP19.08■□□□□ 0.64
CCDC42-203ENST00000581598 EXO1Q9UQ84 846 aaKnown RBP19.08■□□□□ 0.64
CCDC42-203ENST00000581598 TIMM22Q9Y584 194 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 CELSR1Q9NYQ6 3014 aa19.08■□□□□ 0.64
CCDC42-203ENST00000581598 ANKHD1Q8IWZ3 2542 aaKnown RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 CD8B2A6NJW9 211 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 SYT5O00445 386 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 DVL2O14641 736 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 PLOD3O60568 738 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 SNUPNO95149 360 aaKnown RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ACTL6AO96019 429 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 CT45A8P0DMV1 189 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 CT45A9P0DMV2 189 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ABCE1P61221 599 aaKnown RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 OCRLQ01968 901 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 EIPR1Q53HC9 387 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 CT45A2Q5DJT8 189 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ARL13AQ5H913 290 aaPredicted RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 DESI1Q6ICB0 168 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ARSKQ6UWY0 536 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 RELL2Q8NC24 303 aaPredicted RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 NAXEQ8NCW5 288 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 TNIP2Q8NFZ5 429 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ABTB1Q969K4 478 aaPredicted RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 TMCO6Q96DC7 493 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 WDYHV1Q96HA8 205 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 VSTM2LQ96N03 204 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 COL21A1Q96P44 957 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 SORT1Q99523 831 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 C20orf27Q9GZN8 174 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 PFDN4Q9NQP4 134 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 THAP1Q9NVV9 213 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 KLRF1Q9NZS2 232 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 HAO1Q9UJM8 370 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 ITGB1BP2Q9UKP3 347 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 WBP11Q9Y2W2 641 aaKnown RBP19.07■□□□□ 0.64
CCDC42-203ENST00000581598 SLC6A5Q9Y345 797 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 DOCK7Q96N67 2140 aa19.07■□□□□ 0.64
CCDC42-203ENST00000581598 PRAMEF25A6NGN4 478 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 ITM2AO43736 263 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 CBR3O75828 277 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 IL2RAP01589 272 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 SLC1A6P48664 564 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 ASCL1P50553 236 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 MYBPHQ13203 477 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 TOMM20Q15388 145 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 WIPI1Q5MNZ9 446 aaPredicted RBP19.06■□□□□ 0.64
CCDC42-203ENST00000581598 POMZP3Q6PJE2 187 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 SPNS3Q6ZMD2 512 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 FAM9CQ8IZT9 166 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 FAM83FQ8NEG4 500 aaPredicted RBP19.06■□□□□ 0.64
CCDC42-203ENST00000581598 OR9A2Q8NGT5 310 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 RNF138Q8WVD3 245 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 EXOSC8Q96B26 276 aaKnown RBP19.06■□□□□ 0.64
CCDC42-203ENST00000581598 KCNA7Q96RP8 456 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 OR2B2Q9GZK3 357 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 CALHM2Q9HA72 323 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 GALNT9Q9HCQ5 603 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 MID1IP1Q9NPA3 183 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 FOXD3Q9UJU5 478 aaPredicted RBP19.06■□□□□ 0.64
CCDC42-203ENST00000581598 CAMK2AQ9UQM7 478 aa19.06■□□□□ 0.64
CCDC42-203ENST00000581598 MED12Q93074 2177 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 KIAA1549Q9HCM3 1950 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 MBD3L4A6NDZ8 208 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 MBD3L3A6NE82 208 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 MBD3L5A6NJ08 208 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 KDM4EB2RXH2 506 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 UBFD1O14562 309 aaKnown RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 TSPAN2O60636 221 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 SLITRK5O94991 958 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 CHRNGP07510 517 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 ANXA4P09525 319 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 CPN1P15169 458 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 DDCP20711 480 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 MPIP34949 423 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 GCKP35557 465 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 FOXA1P55317 472 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 ZNF763Q0D2J5 394 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 EFR3AQ14156 821 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 DCST1Q5T197 706 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 TRIM46Q7Z4K8 759 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 WDSUB1Q8N9V3 476 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 MBD3L2Q8NHZ7 208 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 ZPLD1Q8TCW7 415 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 KAT2AQ92830 837 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 TMBIM1Q969X1 311 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 DTNBP1Q96EV8 351 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 LRRC46Q96FV0 321 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 C7orf26Q96N11 449 aa19.05■□□□□ 0.64
CCDC42-203ENST00000581598 ZNF317Q96PQ6 595 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 ZNF395Q9H8N7 513 aaPredicted RBP19.05■□□□□ 0.64
CCDC42-203ENST00000581598 TAS2R7Q9NYW3 318 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms