RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 HMGN4O00479 90 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 AIM2O14862 343 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 TNFRSF21O75509 655 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 ITGA10O75578 1167 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 OR2J2O76002 312 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 UBOX5O94941 541 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 CBX6O95503 412 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 AVPP01185 164 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 FBXO45P0C2W1 286 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 ABCD3P28288 659 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 CPOXP36551 454 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 RASSF2P50749 326 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SSR4P51571 173 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 PNLIPRP2P54317 469 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 MRPS22P82650 360 aaKnown RBP9.6□□□□□ -0.87
CCDC47-203ENST00000580986 BNIP1Q12981 228 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 GNA13Q14344 377 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 NTRK2Q16620 822 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 TBR1Q16650 682 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 DUSP5Q16690 384 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 DECR1Q16698 335 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 ARHGAP11BQ3KRB8 267 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 ATAD3BQ5T9A4 648 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 RNF130Q86XS8 419 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SLC30A8Q8IWU4 369 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SLC34A3Q8N130 599 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 COX18Q8N8Q8 333 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 GOLM1Q8NBJ4 401 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 FDCSPQ8NFU4 85 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 RNF138Q8WVD3 245 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 TM9SF4Q92544 642 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SLC9A6Q92581 669 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 HAS2Q92819 552 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SGCZQ96LD1 299 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 TRNT1Q96Q11 434 aaKnown RBP9.6□□□□□ -0.87
CCDC47-203ENST00000580986 OR7D2Q96RA2 312 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 G6PC3Q9BUM1 346 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 OR51I1Q9H343 314 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 CDCP1Q9H5V8 836 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 A4GALTQ9NPC4 353 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 SPAG4Q9NPE6 437 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 EQTNQ9NQ60 294 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 P2RX2Q9UBL9 471 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 CBLCQ9ULV8 474 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 PCDHGB6Q9Y5F9 930 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 NPFFR2Q9Y5X5 522 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 EXPH5Q8NEV8 1989 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 MGAQ8IWI9 3026 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 EBAG9O00559 213 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 TSPAN2O60636 221 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 PPM1BO75688 479 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 IL33O95760 270 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 NGFRP08138 427 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 GABRA3P34903 492 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CASRP41180 1078 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 HLCSP50747 726 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CCL11P51671 97 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 NR0B1P51843 470 aaKnown RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CORO7P57737 925 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 DSTNP60981 165 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 POU6F2P78424 691 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 EFR3AQ14156 821 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF791Q3KP31 576 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 ANGPTL8Q6UXH0 198 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 SLC44A2Q8IWA5 706 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CLEC4FQ8N1N0 589 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 SIRT6Q8N6T7 355 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 HORMAD2Q8N7B1 307 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 GPR151Q8TDV0 419 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 DOK4Q8TEW6 326 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 JADE3Q92613 823 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 TTC9Q92623 222 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 DIO2Q92813 273 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 TMEM125Q96AQ2 219 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 SPACA9Q96E40 222 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 WBP1Q96G27 269 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 C16orf58Q96GQ5 468 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CNTNAP3BQ96NU0 1288 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 SLC39A3Q9BRY0 314 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CNTNAP3Q9BZ76 1288 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF350Q9GZX5 532 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 SAP130Q9H0E3 1048 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 IKZF5Q9H5V7 419 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 HHATLQ9HCP6 504 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 STMN3Q9NZ72 180 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 CALML5Q9NZT1 146 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 GMPR2Q9P2T1 348 aaKnown RBP9.59□□□□□ -0.87
CCDC47-203ENST00000580986 ABCG2Q9UNQ0 655 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 OR10H1Q9Y4A9 318 aa9.59□□□□□ -0.87
CCDC47-203ENST00000580986 DSPPQ9NZW4 1301 aa9.58□□□□□ -0.88
CCDC47-203ENST00000580986 ANKRD33BA6NCL7 494 aa9.58□□□□□ -0.88
CCDC47-203ENST00000580986 OR5H15A6NDH6 313 aa9.58□□□□□ -0.88
CCDC47-203ENST00000580986 TMEM247A6NEH6 219 aa9.58□□□□□ -0.88
CCDC47-203ENST00000580986 A8MUI8 341 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms