RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GFM2Q969S9 779 aaKnown RBP17.75■□□□□ 0.43
LIMD2-209ENST00000580222 EGLN2Q96KS0 407 aa17.75■□□□□ 0.43
LIMD2-209ENST00000580222 TMEM120AQ9BXJ8 343 aa17.75■□□□□ 0.43
LIMD2-209ENST00000580222 BAIAP2L1Q9UHR4 511 aa17.75■□□□□ 0.43
LIMD2-209ENST00000580222 WBP11Q9Y2W2 641 aaKnown RBP17.75■□□□□ 0.43
LIMD2-209ENST00000580222 YARS2Q9Y2Z4 477 aaKnown RBP17.75■□□□□ 0.43
LIMD2-209ENST00000580222 GMNCA6NCL1 334 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 A8MVJ9 347 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 E9PBE3 544 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 TGFBR3LH3BV60 316 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 ACOT7O00154 380 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 ZNF354AO60765 605 aaPredicted RBP17.74■□□□□ 0.43
LIMD2-209ENST00000580222 LDB3O75112 727 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 LRATO95237 230 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 ALDOCP09972 364 aaKnown RBP17.74■□□□□ 0.43
LIMD2-209ENST00000580222 G6PDP11413 515 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 HPCAL1P37235 193 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 SOX3P41225 446 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 MAN2A2P49641 1150 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 ASCL1P50553 236 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 ARFIP2P53365 341 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 DIO3P55073 304 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 STX4Q12846 297 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 PTGR1Q14914 329 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 FBXL19-AS1Q494R0 122 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 Q5PR19 223 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 FAM71E1Q6IPT2 247 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 SCUBE1Q8IWY4 988 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 FAM109AQ8N4B1 249 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 TNIP2Q8NFZ5 429 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 STON2Q8WXE9 905 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 TANKQ92844 425 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 UCN3Q969E3 161 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 NCLNQ969V3 563 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 MARK4Q96L34 752 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 RILPQ96NA2 401 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 AIG1Q9NVV5 245 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 HPF1Q9NWY4 346 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 KLHL14Q9P2G3 628 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 HEY2Q9UBP5 337 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 B4GALT7Q9UBV7 327 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 CLDN16Q9Y5I7 305 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 CUBNO60494 3623 aa17.74■□□□□ 0.43
LIMD2-209ENST00000580222 TRIM64A6NGJ6 449 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 TRIM64BA6NI03 449 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 PGRMC2O15173 223 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 UBDO15205 165 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 AKAP10O43572 662 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 FGF17O60258 216 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 SUSD5O60279 629 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 CTNSO60931 367 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 HRGP04196 525 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 DDCP20711 480 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 CNR1P21554 472 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 PEX19P40855 299 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 DNASE1L1P49184 302 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 ID2Q02363 134 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 WLSQ5T9L3 541 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 SLC48A1Q6P1K1 146 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 CPLX4Q7Z7G2 160 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 OR4N5Q8IXE1 308 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 FAM9CQ8IZT9 166 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 KLHL29Q96CT2 875 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 Q96MF0 132 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 IL1RL2Q9HB29 575 aa17.73■□□□□ 0.43
LIMD2-209ENST00000580222 TUBA8Q9NY65 449 aaPredicted RBP17.73■□□□□ 0.43
LIMD2-209ENST00000580222 PPIEQ9UNP9 301 aaKnown RBP17.73■□□□□ 0.43
LIMD2-209ENST00000580222 MPDZO75970 2070 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 SYNDIG1LA6NDD5 238 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 TUBAL3A6NHL2 446 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 CLCA1A8K7I4 914 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 WWP2O00308 870 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 ERAL1O75616 437 aaKnown RBP17.72■□□□□ 0.43
LIMD2-209ENST00000580222 PIK3R1P27986 724 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 STX1BP61266 288 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 SLC10A1Q14973 349 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 RPS6KA2Q15349 733 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 ULK2Q8IYT8 1036 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 OR4K14Q8NGD5 310 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.72■□□□□ 0.43
LIMD2-209ENST00000580222 EXOSC8Q96B26 276 aaKnown RBP17.72■□□□□ 0.43
LIMD2-209ENST00000580222 RASL10BQ96S79 203 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 FAM173AQ9BQD7 235 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 REEP4Q9H6H4 257 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 PNO1Q9NRX1 252 aaKnown RBP17.72■□□□□ 0.43
LIMD2-209ENST00000580222 GIMAP4Q9NUV9 329 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 EHD3Q9NZN3 535 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 UTS2RQ9UKP6 389 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 PSME2Q9UL46 239 aa17.72■□□□□ 0.43
LIMD2-209ENST00000580222 MYOCOSA0A1B0GUC4 107 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 WASHC1A8K0Z3 465 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 HSPB2A8KAH6 182 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 SCAMP2O15127 329 aaKnown RBP17.71■□□□□ 0.43
LIMD2-209ENST00000580222 GPR75O95800 540 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 IDO1P14902 403 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 DRD4P21917 467 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 CEACAM8P31997 349 aaPredicted RBP17.71■□□□□ 0.43
LIMD2-209ENST00000580222 RPL3P39023 403 aaKnown RBP17.71■□□□□ 0.43
LIMD2-209ENST00000580222 SERTAD2Q14140 314 aa17.71■□□□□ 0.43
LIMD2-209ENST00000580222 HSPB2Q16082 182 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms