RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ZNF385DQ9H6B1 395 aa19.91■□□□□ 0.78
CDC42EP4-203ENST00000578516 NEUROD4Q9HD90 331 aa19.91■□□□□ 0.78
CDC42EP4-203ENST00000578516 SERHLQ9NQF3 203 aa19.91■□□□□ 0.78
CDC42EP4-203ENST00000578516 FAM120CQ9NX05 1096 aaKnown RBP19.91■□□□□ 0.78
CDC42EP4-203ENST00000578516 NPIPA1Q9UND3 350 aa19.91■□□□□ 0.78
CDC42EP4-203ENST00000578516 DNAJC13O75165 2243 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 PRSS51A0A1B0GVH4 220 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 HS6ST1O60243 411 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 ICOSLGO75144 302 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 NKX2-2O95096 273 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 CELA3AP09093 270 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 ZNF24P17028 368 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 NCF2P19878 526 aaPredicted RBP19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 TMED10P49755 219 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 POLR2JP52435 117 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 STX1BP61266 288 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 KCNJ2P63252 427 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 PRR5P85299 388 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 ALDH6A1Q02252 535 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 PLGLB1Q02325 96 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 DPY19L1Q2PZI1 675 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 ANXA8L1Q5VT79 327 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 GK5Q6ZS86 529 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 NATD1Q8N6N6 113 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 FAM98AQ8NCA5 519 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 CCDC115Q96NT0 180 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 COL21A1Q96P44 957 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 TTTY12Q9BZ98 90 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 Q9N2J8 555 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 CBLCQ9ULV8 474 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 LIPGQ9Y5X9 500 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 GTF3C1Q12789 2109 aa19.9■□□□□ 0.78
CDC42EP4-203ENST00000578516 KLRC4-KLRK1H3BQV0 150 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 CDK2AP1O14519 115 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 RFPL3SP0C7P2 107 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 CAPN3P20807 821 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 IL12BP29460 328 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 CASP3P42574 277 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 RNF144AP50876 292 aaPredicted RBP19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 SEC24CP53992 1094 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 MRPS22P82650 360 aaKnown RBP19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 ZNHIT3Q15649 155 aaPredicted RBP19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 SLC2A7Q6PXP3 512 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 CDRT4Q8N9R6 151 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 ZFP62Q8NB50 900 aaPredicted RBP19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 OR56A1Q8NGH5 318 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 OR52N2Q8NGI0 321 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 MED12Q93074 2177 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 SLC35A4Q96G79 324 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 SLC35G5Q96KT7 338 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 FAM173AQ9BQD7 235 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 DOHHQ9BU89 302 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 RTN4RQ9BZR6 473 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 METTL7AQ9H8H3 244 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 AGPAT4Q9NRZ5 378 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 CCDC167Q9P0B6 97 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 BTNL2Q9UIR0 455 aa19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.89■□□□□ 0.77
CDC42EP4-203ENST00000578516 NPIPA5A0A0B4J1W7 369 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 FAM234BA2RU67 622 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 PRAMEF25A6NGN4 478 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 CAPN14A8MX76 684 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 B4DXG7 233 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 NPIPA7E9PJI5 369 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 ADAM10O14672 748 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 TP53I11O14683 189 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 GNB5O14775 395 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 TFECO14948 347 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 ALOX5P09917 674 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 NPIPA8P0DM63 369 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 TROVE2P10155 538 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 PRIM2P49643 509 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 SQLEQ14534 574 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 AGKQ53H12 422 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 FNDC7Q5VTL7 733 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 CDC73Q6P1J9 531 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 C6orf120Q7Z4R8 191 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 TMEM251Q8N6I4 163 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 COX18Q8N8Q8 333 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 PNPT1Q8TCS8 783 aaKnown RBP19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 OR7D2Q96RA2 312 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 SLC35A5Q9BS91 424 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 OSBPL11Q9BXB4 747 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 DEFB127Q9H1M4 99 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 RABEP2Q9H5N1 569 aa19.88■□□□□ 0.77
CDC42EP4-203ENST00000578516 CCDC154A6NI56 674 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 OR6C70A6NIJ9 312 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 SCO2O43819 266 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 PDE9AO76083 593 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 GLSO94925 669 aaPredicted RBP19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 UNC5CO95185 931 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 CBX6O95503 412 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 CRYABP02511 175 aaKnown RBP19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 NAGAP17050 411 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 KRT20P35900 424 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 MAGEA5P43359 124 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 MRPL19P49406 292 aaKnown RBP19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 MAN2A2P49641 1150 aa19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 PPIAP62937 165 aaKnown RBP19.87■□□□□ 0.77
CDC42EP4-203ENST00000578516 CMPK2Q5EBM0 449 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms