RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TMUB1Q9BVT8 246 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 ITPAQ9BY32 194 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 GLIPR2Q9H4G4 154 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 LDAHQ9H6V9 325 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 VIPAS39Q9H9C1 493 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 THAP1Q9NVV9 213 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 DNAJB12Q9NXW2 375 aaKnown RBP14.67□□□□□ -0.06
VAPA-204ENST00000577901 TUBA8Q9NY65 449 aaPredicted RBP14.67□□□□□ -0.06
VAPA-204ENST00000577901 GIMAP2Q9UG22 337 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 HAO1Q9UJM8 370 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 ACAD8Q9UKU7 415 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 ITPR3Q14573 2671 aa14.67□□□□□ -0.06
VAPA-204ENST00000577901 PHF3Q92576 2039 aaKnown RBP14.66□□□□□ -0.06
VAPA-204ENST00000577901 A0A087WV62 115 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 PLOD2O00469 737 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 PDPK1O15530 556 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 WDR1O75083 606 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 COQ9O75208 318 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 CTAG2O75638 210 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 CCL3P10147 92 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 GPC1P35052 558 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 HPCAL1P37235 193 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 ADH7P40394 386 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 MAN2A2P49641 1150 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 PSPHP78330 225 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 EMX2Q04743 252 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 DUSP8Q13202 625 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 RPS6KA2Q15349 733 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 SMU1Q2TAY7 513 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 C1orf185Q5T7R7 199 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 WLSQ5T9L3 541 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 ANKRD26P1Q6NSI1 321 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 ARSKQ6UWY0 536 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 SIMC1Q8NDZ2 872 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 OR7G2Q8NG99 324 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 OR10G3Q8NGC4 313 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 ZFP28Q8NHY6 868 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 NINJ1Q92982 152 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 SARAFQ96BY9 339 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 ZBED6CLQ96FA7 236 aaPredicted RBP14.66□□□□□ -0.06
VAPA-204ENST00000577901 ATP6V1G3Q96LB4 118 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 PPP1R36Q96LQ0 422 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 PRPF18Q99633 342 aaKnown RBP14.66□□□□□ -0.06
VAPA-204ENST00000577901 NXF5Q9H1B4 397 aaKnown RBP14.66□□□□□ -0.06
VAPA-204ENST00000577901 CXXC4Q9H2H0 198 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 EXO5Q9H790 373 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 MANSC1Q9H8J5 431 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 SH2D2AQ9NP31 389 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 CCM2LQ9NUG4 571 aaPredicted RBP14.66□□□□□ -0.06
VAPA-204ENST00000577901 DTX4Q9Y2E6 619 aa14.66□□□□□ -0.06
VAPA-204ENST00000577901 VPS13CQ709C8 3753 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 NIPBLQ6KC79 2804 aaeCLIP14.65□□□□□ -0.06
VAPA-204ENST00000577901 TRGV5A0A0B4J1U4 118 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 FAM221AA4D161 298 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 FRG2CA6NGY1 282 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ABCD3P28288 659 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 MC3RP41968 323 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 MANFP55145 182 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 PDE7AQ13946 482 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 NNATQ16517 81 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 SLC25A35Q3KQZ1 300 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 TBCELQ5QJ74 424 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 TMEM107Q6UX40 140 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 TMEM64Q6YI46 380 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 NUP54Q7Z3B4 507 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ZZZ3Q8IYH5 903 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 FBXW8Q8N3Y1 598 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 NATD1Q8N6N6 113 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 CHDHQ8NE62 594 aaPredicted RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 DIO2Q92813 273 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ELP4Q96EB1 424 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 SECISBP2Q96T21 854 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 C1orf50Q9BV19 199 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 POLDIP3Q9BY77 421 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 AKTIPQ9H8T0 292 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ANKRA2Q9H9E1 313 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ATAD3AQ9NVI7 634 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 DDX18Q9NVP1 670 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 PNPOQ9NVS9 261 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 ALKBH4Q9NXW9 302 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 NOP53Q9NZM5 478 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 ATP6V1HQ9UI12 483 aa14.65□□□□□ -0.06
VAPA-204ENST00000577901 C19orf53Q9UNZ5 99 aaPredicted RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 GPR55Q9Y2T6 319 aaPredicted RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 CHCHD2Q9Y6H1 151 aaPredicted RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 MAP1AP78559 2803 aaPredicted RBP14.65□□□□□ -0.06
VAPA-204ENST00000577901 INTS1Q8N201 2190 aaKnown RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 ANKRD33BA6NCL7 494 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 FAM47E-STBD1D6RA91 191 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 SLCO1B7G3V0H7 640 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 SCAMP2O15127 329 aaKnown RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 TO15178 435 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 HCN1O60741 890 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 ERN1O75460 977 aaKnown RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 PPM1BO75688 479 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 IFI6P09912 130 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 GABRA1P14867 456 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 PRPS1L1P21108 318 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 PIGAP37287 484 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms