RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 C1QL3Q5VWW1 255 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 OR4F3Q6IEY1 312 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 SLC30A6Q6NXT4 461 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PAOXQ6QHF9 649 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PACS2Q86VP3 889 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 CDRT4Q8N9R6 151 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 ACTRT2Q8TDY3 377 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 SSC4DQ8WTU2 575 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 DYDC1Q8WWB3 177 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 CKAP2Q8WWK9 683 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 TMCO6Q96DC7 493 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 ZNF597Q96LX8 424 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 CXorf36Q9H7Y0 433 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 METTL7AQ9H8H3 244 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 NEUROD4Q9HD90 331 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 EQTNQ9NQ60 294 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 USH1CQ9Y6N9 552 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 ZNF407Q9C0G0 2248 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 A0A1B0GVC2 190 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 RNASET2O00584 256 aaKnown RBP17.68■□□□□ 0.42
SS18-208ENST00000577751 CDC40O60508 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
SS18-208ENST00000577751 PDE9AO76083 593 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 CELA3AP09093 270 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 RNF224P0DH78 156 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 IL12BP29460 328 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 GABRA3P34903 492 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 KRT20P35900 424 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 CLNS1AP54105 237 aaKnown RBP17.68■□□□□ 0.42
SS18-208ENST00000577751 HBA1P69905 142 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 SLC10A1Q14973 349 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 DPY19L1Q2PZI1 675 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 VPS26BQ4G0F5 336 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 MFSD12Q6NUT3 480 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 ARHGAP11AQ6P4F7 1023 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 EPGNQ6UW88 154 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 TRILQ7L0X0 811 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 EFHD2Q96C19 240 aaPredicted RBP17.68■□□□□ 0.42
SS18-208ENST00000577751 TEX37Q96LM6 180 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 JSRP1Q96MG2 331 aaPredicted RBP17.68■□□□□ 0.42
SS18-208ENST00000577751 OSBPL11Q9BXB4 747 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 UBQLN3Q9H347 655 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 ZCCHC3Q9NUD5 404 aaKnown RBP17.68■□□□□ 0.42
SS18-208ENST00000577751 LIPGQ9Y5X9 500 aa17.68■□□□□ 0.42
SS18-208ENST00000577751 TRGV8A0A0C4DH27 118 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 PRAMEF25A6NGN4 478 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 TGDSO95455 350 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 IL33O95760 270 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 HMGN2P05204 90 aaKnown RBP17.67■□□□□ 0.42
SS18-208ENST00000577751 ACP2P11117 423 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 CYP4B1P13584 511 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 ABOP16442 354 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 ELAVL4P26378 380 aaKnown RBP17.67■□□□□ 0.42
SS18-208ENST00000577751 PTGS2P35354 604 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 KIR3DL1P43629 444 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 CCT3P49368 545 aaKnown RBP17.67■□□□□ 0.42
SS18-208ENST00000577751 PRIM2P49643 509 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 UFM1P61960 85 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 MRPS22P82650 360 aaKnown RBP17.67■□□□□ 0.42
SS18-208ENST00000577751 C3AR1Q16581 482 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 DECR1Q16698 335 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 TIGD3Q6B0B8 471 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 FJX1Q86VR8 437 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 CLECL1Q8IZS7 167 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 SLC16A11Q8NCK7 471 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 MOAP1Q96BY2 351 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 C16orf58Q96GQ5 468 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 MAGEB18Q96M61 343 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 OR52B2Q96RD2 323 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 ACKR4Q9NPB9 350 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 GIN1Q9NXP7 522 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 MRTO4Q9UKD2 239 aaKnown RBP17.67■□□□□ 0.42
SS18-208ENST00000577751 SNX8Q9Y5X2 465 aa17.67■□□□□ 0.42
SS18-208ENST00000577751 FREM3P0C091 2139 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 DNAJC13O75165 2243 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 PRSS51A0A1B0GVH4 220 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GXYLT2A0PJZ3 443 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 E9PBE3 544 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 ADAM10O14672 748 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 SUSD5O60279 629 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 MASP1P48740 699 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GAS1P54826 345 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 DUSP5Q16690 384 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 SPANXN4Q5MJ08 99 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 ANXA8L1Q5VT79 327 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 NXNQ6DKJ4 435 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 SZRD1Q7Z422 152 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 DOLPP1Q86YN1 238 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 OR56A1Q8NGH5 318 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 FAM57AQ8TBR7 257 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 FAM110BQ8TC76 370 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 SFXN5Q8TD22 340 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GPR151Q8TDV0 419 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 PIK3R3Q92569 461 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 SLC9A6Q92581 669 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GNRHR2Q96P88 292 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 PSMG3-AS1Q96PY0 264 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GALNT9Q9HCQ5 603 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 GPATCH2Q9NW75 528 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 KLRF1Q9NZS2 232 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 B4GALT7Q9UBV7 327 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms