RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 MT-ATP6P00846 226 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 SLC35G4P0C7Q5 338 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 RALAP11233 206 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 AZU1P20160 251 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 PTPN6P29350 595 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 XCR1P46094 333 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 HERVK_113P63132 956 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 ERVK-8P63133 956 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 GAMTQ14353 236 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 RAB35Q15286 201 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 BEND6Q5SZJ8 279 aaPredicted RBP3.6□□□□□ -1.83
CDC27-219ENST00000576484 FHL5Q5TD97 284 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 DMKNQ6E0U4 476 aaPredicted RBP3.6□□□□□ -1.83
CDC27-219ENST00000576484 KDM8Q8N371 416 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 GPR137CQ8N3F9 429 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 RNF148Q8N7C7 305 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 MINDY2Q8NBR6 621 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 OR56B1Q8NGI3 324 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 BADQ92934 168 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 CASD1Q96PB1 797 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 OR5M11Q96RB7 305 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 ERVK-6Q9BXR3 956 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 OPN3Q9H1Y3 402 aaPredicted RBP3.6□□□□□ -1.83
CDC27-219ENST00000576484 DUS2Q9NX74 493 aaKnown RBP3.6□□□□□ -1.83
CDC27-219ENST00000576484 GDAP2Q9NXN4 497 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 VNN3Q9NY84 501 aa3.6□□□□□ -1.83
CDC27-219ENST00000576484 BARX2Q9UMQ3 279 aaPredicted RBP3.6□□□□□ -1.83
CDC27-219ENST00000576484 TGFAP01135 160 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 ETS1P14921 441 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 SDC1P18827 310 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 ACVR1BP36896 505 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 RABIFP47224 123 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 SLC26A5P58743 744 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 RPS6P62753 249 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 IL18R1Q13478 541 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 ASAH1Q13510 395 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 PDIA5Q14554 519 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 PARGQ86W56 976 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 TFB1MQ8WVM0 346 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 CCDC47Q96A33 483 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 WRAP53Q9BUR4 548 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 YTHDF1Q9BYJ9 559 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 ATG10Q9H0Y0 220 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 EXOSC3Q9NQT5 275 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDC27-219ENST00000576484 GHRLQ9UBU3 117 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 CLEC4EQ9ULY5 219 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 MOKQ9UQ07 419 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 PLEKHA6Q9Y2H5 1048 aa3.59□□□□□ -1.83
CDC27-219ENST00000576484 EXOSC1Q9Y3B2 195 aaKnown RBP3.59□□□□□ -1.83
CDC27-219ENST00000576484 TTC26A0AVF1 554 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 ALOX15BO15296 676 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 LY6G6DO95868 133 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 DUX4L4P0CJ87 422 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.84
CDC27-219ENST00000576484 HTR5AP47898 357 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 IL9RQ01113 521 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 CD47Q08722 323 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 SERTAD2Q14140 314 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 LDLRAP1Q5SW96 308 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 SLC22A10Q63ZE4 541 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 OLFML2AQ68BL7 652 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 NET1Q7Z628 596 aaPredicted RBP3.58□□□□□ -1.84
CDC27-219ENST00000576484 MRPL43Q8N983 215 aaKnown RBP3.58□□□□□ -1.84
CDC27-219ENST00000576484 CCDC26Q8TAB7 109 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 MCHR2Q969V1 340 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 ADIPOR1Q96A54 375 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 SAMD8Q96LT4 415 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 NMNAT2Q9BZQ4 307 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 ELOVL4Q9GZR5 314 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 SOHLH2Q9NX45 425 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 NINJ2Q9NZG7 142 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 KLRF1Q9NZS2 232 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 P2RX2Q9UBL9 471 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 UBE4BO95155 1302 aa3.58□□□□□ -1.84
CDC27-219ENST00000576484 RNF103-CHMP3A0A140T963 221 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 RNF222A6NCQ9 220 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 FAM220BPB1ANY3 271 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 E9PMD0 336 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 SGK494L7N484 410 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 TM9SF1O15321 606 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 NUDT21O43809 227 aaKnown RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 SSX5O60225 188 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 SEC22BO75396 215 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 IGFBP1P08833 259 aaPredicted RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 P0C879 139 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 TSPAN8P19075 237 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 IGHV1-2P23083 117 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 ATXN3P54252 364 aaPredicted RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 GABPB1Q06547 395 aaPredicted RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 PUDPQ08623 228 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 TTC31Q49AM3 519 aaPredicted RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 SLC39A4Q6P5W5 647 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 FBXO16Q8IX29 292 aaPredicted RBP3.57□□□□□ -1.84
CDC27-219ENST00000576484 UBQLNLQ8IYU4 475 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 MCOLN2Q8IZK6 566 aa3.57□□□□□ -1.84
CDC27-219ENST00000576484 ZNF619Q8N2I2 560 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms