RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM120BQ96EK7 910 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SCMH1Q96GD3 660 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 NODALQ96S42 347 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 DUSP26Q9BV47 211 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TRIM8Q9BZR9 551 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 DPY30Q9C005 99 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 DCLRE1BQ9H816 532 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PROK2Q9HC23 129 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 DDX18Q9NVP1 670 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 FBXO34Q9NWN3 711 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TMEM181Q9P2C4 612 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 STX18Q9P2W9 335 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 NKX1-2Q9UD57 310 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 POMPQ9Y244 141 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SNX8Q9Y5X2 465 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 LIPGQ9Y5X9 500 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 KCNE3Q9Y6H6 103 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SVILO95425 2214 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NPIPA5A0A0B4J1W7 369 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CENPVL1A0A0U1RR11 272 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 A0A1W2PRB8 838 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 OR6C76A6NM76 312 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 FAM166BA8MTA8 275 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 A8MVJ9 347 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NPIPA7E9PJI5 369 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NR5A2O00482 541 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ADAM10O14672 748 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NME2P1O60361 137 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 TBX19O60806 448 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 UGT2B11O75310 529 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ERN1O75460 977 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SLC22A3O75751 556 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CIB2O75838 187 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 BCAS2O75934 225 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 KRT36O76013 467 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PDE5AO76074 875 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CPSF4O95639 269 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NPPAP01160 153 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SP1P08047 785 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CELA3AP09093 270 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NPIPA8P0DM63 369 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NME2P22392 152 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 MPIP34949 423 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 TRHRP34981 398 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CASRP41180 1078 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 GSTM5P46439 218 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CYB561P49447 251 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 MEOX1P50221 254 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 POLR2JP52435 117 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 MANFP55145 182 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PSG6Q00889 435 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PLCXD2Q0VAA5 305 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ART3Q13508 389 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 TP53BP2Q13625 1128 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 LASP1Q14847 261 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 DUSP5Q16690 384 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF791Q3KP31 576 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 VPS26BQ4G0F5 336 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CCNJQ5T5M9 372 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SLC2A7Q6PXP3 512 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CAMKMTQ7Z624 323 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 HPS6Q86YV9 775 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SLC44A2Q8IWA5 706 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SULF2Q8IWU5 870 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PCYOX1LQ8NBM8 494 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 GLB1L3Q8NCI6 653 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PSD4Q8NDX1 1056 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 NUP43Q8NFH3 380 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 OR7G1Q8NGA0 311 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 OR4A15Q8NGL6 344 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 OR8K3Q8NH51 312 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CPT1CQ8TCG5 803 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 COQ8BQ96D53 544 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 OMA1Q96E52 524 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 AURKBQ96GD4 344 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF764Q96H86 408 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 ART5Q96L15 291 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CDRT15Q96T59 188 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 HOPXQ9BPY8 73 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 KLHDC3Q9BQ90 382 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 RTN4RQ9BZR6 473 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 BHLHE41Q9C0J9 482 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 RNF32Q9H0A6 362 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 GALNT9Q9HCQ5 603 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SH2D2AQ9NP31 389 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SERHLQ9NQF3 203 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 HPF1Q9NWY4 346 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 SUCOQ9UBS9 1254 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 TEKT2Q9UIF3 430 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 PSME2Q9UL46 239 aa7.27□□□□□ -1.25
CCDC40-215ENST00000576033 C19orf53Q9UNZ5 99 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 YARS2Q9Y2Z4 477 aaKnown RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 CHCHD2Q9Y6H1 151 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 USP9XQ93008 2570 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-215ENST00000576033 MED12Q93074 2177 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 NINQ8N4C6 2090 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms