RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 ZNF701Q9NV72 531 aaPredicted RBP4.47□□□□□ -1.69
TSR1-203ENST00000575049 SLC2A8Q9NY64 477 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 PIPOXQ9P0Z9 390 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 ERVK-18Q9QC07 812 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 DAPK2Q9UIK4 370 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 ERRFI1Q9UJM3 462 aaPredicted RBP4.47□□□□□ -1.69
TSR1-203ENST00000575049 PILRAQ9UKJ1 303 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 RAI2Q9Y5P3 530 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 RNF215Q9Y6U7 377 aa4.47□□□□□ -1.69
TSR1-203ENST00000575049 LAMA4Q16363 1823 aa4.46□□□□□ -1.69
TSR1-203ENST00000575049 CAMTA1Q9Y6Y1 1673 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SMIM35A0A1B0GVV1 85 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ZNF233A6NK53 670 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 OR6C75A6NL08 312 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 WASHC1A8K0Z3 465 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 ARPC2O15144 300 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TRAPPC3O43617 180 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TIMM8AO60220 97 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 KRT36O76013 467 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 RNF8O76064 485 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 DFFBO76075 338 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TGM6O95932 706 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 HPRP00739 348 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CRYGBP07316 175 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 F7P08709 466 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 GSTA2P09210 222 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CLTAP09496 248 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ANXA4P09525 319 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 NCK1P16333 377 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TSPAN8P19075 237 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 PTNP21246 168 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 NAMPTP43490 491 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 NPY2RP49146 381 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CCT3P49368 545 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 BDH1Q02338 343 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 DMPKQ09013 629 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 BNIP1Q12981 228 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 PPIL2Q13356 520 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 RBBP5Q15291 538 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 SPA17Q15506 151 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CTF1Q16619 201 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 HNRNPA1L2Q32P51 320 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 PLCXD3Q63HM9 321 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 AP1ARQ63HQ0 302 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SNRNP48Q6IEG0 339 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 C8orf74Q6P047 294 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TMEM220Q6QAJ8 160 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 WASH2PQ6VEQ5 465 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SCARA5Q6ZMJ2 495 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 KCTD8Q6ZWB6 473 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CYP4V2Q6ZWL3 525 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 GOLGA7Q7Z5G4 137 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 PARGQ86W56 976 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CHERPQ8IWX8 916 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 PRSS35Q8N3Z0 413 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 TRIML2Q8N7C3 387 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SYT14Q8NB59 555 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 RNF149Q8NC42 400 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 DDHD1Q8NEL9 900 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 OR6M1Q8NGM8 313 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 OSR1Q8TAX0 266 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 TMEM37Q8WXS4 190 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 INPP4AQ96PE3 977 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 ALS2CR12Q96Q35 445 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 S1PR3Q99500 378 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 UBAC1Q9BSL1 405 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ANKRD60Q9BZ19 345 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 DHX33Q9H6R0 707 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 EBF2Q9HAK2 575 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ZNF160Q9HCG1 818 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 CHRAC1Q9NRG0 131 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SMOXQ9NWM0 555 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 QPCTLQ9NXS2 382 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 MIOXQ9UGB7 285 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 SLC12A6Q9UHW9 1150 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 ZNF639Q9UID6 485 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 MRTO4Q9UKD2 239 aaKnown RBP4.46□□□□□ -1.7
TSR1-203ENST00000575049 TBC1D24Q9ULP9 559 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 NWD2Q9ULI1 1742 aa4.46□□□□□ -1.7
TSR1-203ENST00000575049 C1orf167Q5SNV9 1468 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 A0A0J9YYE9 177 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 MTMR11A4FU01 709 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 DNAJC9-AS1A6NH13 148 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 TMEM178BH3BS89 294 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 PSMD11O00231 422 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 GAPDHSO14556 408 aaPredicted RBP4.45□□□□□ -1.7
TSR1-203ENST00000575049 LIN7AO14910 233 aaPredicted RBP4.45□□□□□ -1.7
TSR1-203ENST00000575049 TIMM23O14925 209 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
TSR1-203ENST00000575049 NBR2O15453 112 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 RNASEH1O60930 286 aaKnown RBP4.45□□□□□ -1.7
TSR1-203ENST00000575049 ATP6V1G2O95670 118 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 TRBC1P01850 177 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 LYNP07948 512 aa4.45□□□□□ -1.7
TSR1-203ENST00000575049 STAG3L2P0CL84 134 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms