RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 OMA1Q96E52 524 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 GIMAP5Q96F15 307 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PANX1Q96RD7 426 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 SECISBP2Q96T21 854 aaKnown RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CNIH4Q9P003 139 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CCDC167Q9P0B6 97 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 SEC14L3Q9UDX4 400 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CBLCQ9ULV8 474 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 OSGIN2Q9Y236 505 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PCDHGB3Q9Y5G1 929 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 USP9XQ93008 2570 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 ESPL1Q14674 2120 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 RNF103-CHMP3A0A140T963 221 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 CCDC154A6NI56 674 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 OR6C70A6NIJ9 312 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 RFXANKO14593 260 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 REM1O75628 298 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 KCNH1O95259 989 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
RPAIN-213ENST00000573577 ALOX5P09917 674 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 MEOX1P50221 254 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GNGT1P63211 74 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 EFR3AQ14156 821 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 RCAN2Q14206 197 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 LASP1Q14847 261 aaKnown RBP12.44□□□□□ -0.42
RPAIN-213ENST00000573577 TIGD2Q4W5G0 525 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 AGKQ53H12 422 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 TBCELQ5QJ74 424 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 CGB2Q6NT52 195 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GFRALQ6UXV0 394 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 NPSR1Q6W5P4 371 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 OR10G3Q8NGC4 313 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 OR5M3Q8NGP4 307 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GOT1L1Q8NHS2 421 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GPR151Q8TDV0 419 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 PAQR8Q8TEZ7 354 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 JADE3Q92613 823 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 HOXB13Q92826 284 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-213ENST00000573577 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 TMBIM1Q969X1 311 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 TMCO6Q96DC7 493 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 ITCHQ96J02 903 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 STACQ99469 402 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 ACTRT3Q9BYD9 372 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 DUSP22Q9NRW4 184 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GIN1Q9NXP7 522 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 COL12A1Q99715 3063 aa12.44□□□□□ -0.42
RPAIN-213ENST00000573577 GMNCA6NCL1 334 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 DUXAA6NLW8 204 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 NPIPA5E9PKD4 350 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 HS6ST1O60243 411 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 NME6O75414 186 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 WISP2O76076 250 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 NKX2-2O95096 273 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ANP32DO95626 131 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CCL3P10147 92 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CNR1P21554 472 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 GABRA3P34903 492 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CHI3L1P36222 383 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ZFP36L2P47974 494 aaKnown RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 PNLIPRP2P54317 469 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 FBXW4P57775 412 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 GPR85P60893 370 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 GAB1Q13480 694 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 KRTCAP3Q53RY4 240 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 RNFT1Q5M7Z0 435 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CDC73Q6P1J9 531 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 BLOC1S3Q6QNY0 202 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 GK5Q6ZS86 529 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ZNF621Q6ZSS3 439 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 C6orf120Q7Z4R8 191 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CPLX4Q7Z7G2 160 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ZFP62Q8NB50 900 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 OR5AK3PQ8NH89 298 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SPPL2AQ8TCT8 520 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ADAMTS15Q8TE58 950 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 DIO2Q92813 273 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SPDL1Q96EA4 605 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SLC35A4Q96G79 324 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 GPR137Q96N19 417 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 COL21A1Q96P44 957 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 FAM173AQ9BQD7 235 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SLC35A5Q9BS91 424 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 TSPAN10Q9H1Z9 355 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SH2D2AQ9NP31 389 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 ERRFI1Q9UJM3 462 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 NPIPA1Q9UND3 350 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
RPAIN-213ENST00000573577 CHCHD2Q9Y6H1 151 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-213ENST00000573577 POLEQ07864 2286 aa12.42□□□□□ -0.42
RPAIN-213ENST00000573577 ANKRD33BA6NCL7 494 aa12.42□□□□□ -0.42
RPAIN-213ENST00000573577 NR5A2O00482 541 aa12.42□□□□□ -0.42
RPAIN-213ENST00000573577 TFECO14948 347 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-213ENST00000573577 KRT75O95678 551 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms