RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DCHS1Q96JQ0 3298 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 GVINP1Q7Z2Y8 2422 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SDK1Q7Z5N4 2213 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 NUP205Q92621 2012 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 CEP192Q8TEP8 1941 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 CHD5Q8TDI0 1954 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 LOC285095A0A1B0GVY8 99 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 ERI2A8K979 691 aaKnown RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 TMX2-CTNND1H3BSU7 103 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 STX7O15400 261 aaKnown RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 CIDEAO60543 219 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TPPPO94811 219 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SLC25A14O95258 325 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 LDLRP01130 860 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 FGF1P05230 155 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 RALBP11234 206 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 VCLP18206 1134 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 LHCGRP22888 699 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 ACP1P24666 158 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SPINT3P49223 89 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 LMAN1P49257 510 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 STC1P52823 247 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 DRG2P55039 364 aaKnown RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 DCDC1P59894 354 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SARNPP82979 210 aaKnown RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 CCZ1BP86790 482 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 CCZ1P86791 482 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 CDK3Q00526 305 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 WASHC5Q12768 1159 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 MFAP5Q13361 173 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 ITGA9Q13797 1035 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SLC1A5Q15758 541 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 FAM53AQ6NSI3 398 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 FAM180BQ6P0A1 224 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 GLT6D1Q7Z4J2 308 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TAF8Q7Z7C8 310 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 SLC13A5Q86YT5 568 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 GPALPP1Q8IXQ4 340 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TRAM1L1Q8N609 369 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 ARL10Q8N8L6 244 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 AVL9Q8NBF6 648 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 IPMKQ8NFU5 416 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 GDAP1Q8TB36 358 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 DTX3LQ8TDB6 740 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 BRSK1Q8TDC3 778 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TSACCQ96A04 125 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 TADA1Q96BN2 335 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SENP5Q96HI0 755 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 SPATA13Q96N96 652 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TRIB3Q96RU7 358 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 C19orf43Q9BQ61 176 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 RIOK2Q9BVS4 552 aaKnown RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 SPATA16Q9BXB7 569 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 GSDMCQ9BYG8 508 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 ABCG8Q9H221 673 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 DPEP2Q9H4A9 486 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 LRRC40Q9H9A6 602 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 SLC52A3Q9NQ40 469 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 VPS18Q9P253 973 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TRIM10Q9UDY6 481 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 APPL1Q9UKG1 709 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 PACSIN2Q9UNF0 486 aaPredicted RBP3.62□□□□□ -1.83
NUP88-202ENST00000570937 GPR34Q9UPC5 381 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 DMDP11532 3685 aa3.62□□□□□ -1.83
NUP88-202ENST00000570937 TNRC6BQ9UPQ9 1833 aaKnown RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 GLYATL1P3A0A0U1RQE8 302 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 MED19A0JLT2 244 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 OR5K4A6NMS3 321 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 NDUFS4O43181 175 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 NUDT21O43809 227 aaKnown RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 VEGFDO43915 354 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GPR137BO60478 399 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 PTP4A3O75365 173 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 IFNB1P01574 187 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 FGGP02679 453 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 SLC4A1P02730 911 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 IVLP07476 585 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 LIFP15018 202 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GNB3P16520 340 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GNAZP19086 355 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 CHRNB4P30926 498 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 FDFT1P37268 417 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 SPAM1P38567 509 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 HADHAP40939 763 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GNPDA1P46926 289 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ACADVLP49748 655 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ERVK11-1P61568 191 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 C1orf61Q13536 156 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 TAF1AQ15573 450 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 CLPPQ16740 277 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 DEFB133Q30KQ1 61 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GPR33Q49SQ1 333 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 LDLRAP1Q5SW96 308 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ALS2CLQ60I27 953 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 DOK6Q6PKX4 331 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 KDELC1Q6UW63 502 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 PPP1R21Q6ZMI0 780 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms