RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CTAGE4Q8IX94 777 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 UBQLNLQ8IYU4 475 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 PTGR2Q8N8N7 351 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-204ENST00000570902 OR4K17Q8NGC6 315 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 ZC3HAV1LQ96H79 300 aaKnown RBP17.14■□□□□ 0.33
SCARF1-204ENST00000570902 HS3ST6Q96QI5 342 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 ZDHHC18Q9NUE0 388 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 SLC12A4Q9UP95 1085 aa17.14■□□□□ 0.33
SCARF1-204ENST00000570902 TLN2Q9Y4G6 2542 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 A0A096LPK6 155 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TSPAN2O60636 221 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TMCC2O75069 709 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TNFRSF21O75509 655 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TCEA1P23193 301 aaKnown RBP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 B3GALT5-AS1P59052 145 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 SIRPAP78324 504 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 MRPS22P82650 360 aaKnown RBP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 MRPS35P82673 323 aaKnown RBP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 LTB4RQ15722 352 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 GGTA1PQ4G0N0 100 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 LARP4Q71RC2 724 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF550Q7Z398 422 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF675Q8TD23 568 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TMEM171Q8WVE6 324 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TM4SF18Q96CE8 201 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 CNRIP1Q96F85 164 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF681Q96N22 645 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 CXorf56Q9H5V9 222 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 NMRK1Q9NWW6 199 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 DMGDHQ9UI17 866 aaKnown RBP17.13■□□□□ 0.33
SCARF1-204ENST00000570902 ADAM21Q9UKJ8 722 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 TMCO1Q9UM00 188 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 ZANQ9Y493 2812 aa17.13■□□□□ 0.33
SCARF1-204ENST00000570902 LINC01387J3KSC0 135 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 CGAP01215 116 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 CT45A8P0DMV1 189 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 CT45A9P0DMV2 189 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 LOXP28300 417 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-204ENST00000570902 ALDH9A1P49189 494 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 PNLIPRP2P54317 469 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 TRA2BP62995 288 aaKnown RBP17.12■□□□□ 0.33
SCARF1-204ENST00000570902 DUSP2Q05923 314 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 GALNT1Q10472 559 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-204ENST00000570902 TRAF3Q13114 568 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 GANABQ14697 944 aaKnown RBP17.12■□□□□ 0.33
SCARF1-204ENST00000570902 ERCC6LQ2NKX8 1250 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 CT45A2Q5DJT8 189 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 SGO1Q5FBB7 561 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 RNF138Q8WVD3 245 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 FIG4Q92562 907 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
SCARF1-204ENST00000570902 GPR78Q96P69 363 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 RNF122Q9H9V4 155 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 BRF2Q9HAW0 419 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 PFDN4Q9NQP4 134 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 PPP4R1LQ9P1A2 415 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 UTS2RQ9UKP6 389 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 PROCRQ9UNN8 238 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF175Q9Y473 711 aa17.12■□□□□ 0.33
SCARF1-204ENST00000570902 RAI1Q7Z5J4 1906 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-204ENST00000570902 DSCAMO60469 2012 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 STX16-NPEPL1H3BU86 382 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 STX16O14662 325 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 PPP3CBP16298 524 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 TBXA2RP21731 343 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 TYK2P29597 1187 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 SERPINB8P50452 374 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 GAS1P54826 345 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 CORO7P57737 925 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF628Q5EBL2 1059 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 BEX5Q5H9J7 111 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 TECRLQ5HYJ1 363 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 RAET1LQ5VY80 246 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 MILR1Q7Z6M3 343 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 SAMD14Q8IZD0 417 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-204ENST00000570902 PHF21BQ96EK2 531 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 PIGQQ9BRB3 760 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 PINK1Q9BXM7 581 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 PCTPQ9UKL6 214 aa17.11■□□□□ 0.33
SCARF1-204ENST00000570902 COL6A5A8TX70 2615 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 FBN1P35555 2871 aaKnown RBP17.1■□□□□ 0.33
SCARF1-204ENST00000570902 CRLF1O75462 422 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 ESRRBO95718 433 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
SCARF1-204ENST00000570902 FCGR2AP12318 317 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 OCRLQ01968 901 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 FAM180BQ6P0A1 224 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 CCDC116Q8IYX3 515 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 FADS6Q8N9I5 356 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 ZNF610Q8N9Z0 462 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 OR4F6Q8NGB9 312 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 SELENOMQ8WWX9 145 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 IGFBPL1Q8WX77 278 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 VSTM2LQ96N03 204 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
SCARF1-204ENST00000570902 STMN4Q9H169 189 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-204ENST00000570902 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms