RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ZNF888P0CJ79 500 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 PORP16435 677 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 POLR2CP19387 275 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CSNK2A2P19784 350 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CMPK1P30085 196 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SERPINB1P30740 379 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 HTR3AP46098 478 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 KHKP50053 298 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ETV1P50549 477 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 DAB2P98082 770 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 FUT5Q11128 374 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SPHARQ15513 63 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 FBXO43Q4G163 708 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM196Q5HYL7 178 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR2G6Q5TZ20 316 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ARHGAP11AQ6P4F7 1023 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM80Q96HE8 168 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 BCL7BQ9BQE9 202 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM168Q9H0V1 697 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MMP27Q9H306 513 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MARCH7Q9H992 704 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ACSS1Q9NUB1 689 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 EHD3Q9NZN3 535 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SH3BGRL2Q9UJC5 107 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 YARS2Q9Y2Z4 477 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ASB4Q9Y574 426 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 GPC6Q9Y625 555 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 A8MU76 341 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 K7EQS6 105 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MRPS14O60783 128 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 DRD2P14416 443 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 HOXB2P14652 356 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 COL9A1P20849 921 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CSTF2P33240 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MPIP34949 423 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SOX6P35712 828 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TGM3Q08188 693 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ILKQ13418 452 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SHHQ15465 462 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MLIPQ5VWP3 458 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TYW3Q6IPR3 259 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF730Q6ZMV8 503 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SPATC1Q76KD6 591 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 PRICKLE2Q7Z3G6 844 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 AMIGO1Q86WK6 493 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF565Q8N9K5 539 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SLC16A11Q8NCK7 471 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR2L5Q8NG80 312 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR9Q1Q8NGQ5 310 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR2L8Q8NGY9 312 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 GATAD2BQ8WXI9 593 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TRMT61AQ96FX7 289 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OPALINQ96PE5 141 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR7D2Q96RA2 312 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ASPNQ9BXN1 380 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SRMSQ9H3Y6 488 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 C8orf33Q9H7E9 229 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 INIPQ9NRY2 104 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 GIMAP4Q9NUV9 329 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MYO10Q9HD67 2058 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 NPIPA5A0A0B4J1W7 369 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 PRSS38A1L453 326 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 FAM170BA6NMN3 283 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 NPIPA7E9PJI5 369 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MPZL2O60487 215 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 KLF8O95600 359 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 NPIPA8P0DM63 369 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 PVRP15151 417 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TGM1P22735 817 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 RPS19P39019 145 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 EIF2DP41214 584 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 GPR4P46093 362 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ADPRHP54922 357 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 GPR68Q15743 365 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SPANXN2Q5MJ10 180 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ATAT1Q5SQI0 421 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF367Q7RTV3 350 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 LYSMD2Q8IV50 215 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 RASSF5Q8WWW0 418 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 OR1E3Q8WZA6 343 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 SLC6A18Q96N87 628 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 NKX2-4Q9H2Z4 354 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 HHATLQ9HCP6 504 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 STARD5Q9NSY2 213 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 RYDENQ9NUL5 291 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM74BQ9NUR3 256 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 TSC22D4Q9Y3Q8 395 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 A0A087WUU8 490 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 A8MVJ9 347 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 LDB3O75112 727 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 UPK1BO75841 260 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 MED26O95402 600 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 HBQ1P09105 142 aa8.21□□□□□ -1.09
LINC00558-201ENST00000569422 CCNYL3P0C7X3 344 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms