RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TP53INP1Q96A56 240 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 PPCDCQ96CD2 204 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 CCDC120Q96HB5 630 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 JSRP1Q96MG2 331 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 DUSP26Q9BV47 211 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 TTTY12Q9BZ98 90 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 BHLHE41Q9C0J9 482 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 C1orf21Q9H246 121 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 IL1RL2Q9HB29 575 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 MIEF1Q9NQG6 463 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ATAD3AQ9NVI7 634 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 FAM120CQ9NX05 1096 aaKnown RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 LEF1Q9UJU2 399 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-225ENST00000569245 CFL2Q9Y281 166 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF835Q9Y2P0 537 aa13.32□□□□□ -0.28
COMMD4-225ENST00000569245 ZGRF1Q86YA3 2104 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ERICH4A6NGS2 130 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 CYSRT1A8MQ03 144 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 TP53I11O14683 189 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 SCN2BO60939 215 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 LAMP1P11279 417 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 COL8A1P27658 744 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 CPA2P48052 419 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 RASSF2P50749 326 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 WNT3P56703 355 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 DUSP2Q05923 314 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 LTB4RQ15722 352 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 PGS1Q32NB8 556 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 TRMT12Q53H54 448 aaKnown RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ANXA8L1Q5VT79 327 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 PRAMEF20Q5VT98 475 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 REP15Q6BDI9 236 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ARHGAP11AQ6P4F7 1023 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 LYPD8Q6UX82 237 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 HACD2Q6Y1H2 254 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 Q6ZPB1 254 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 TICAM1Q8IUC6 712 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 FBXW8Q8N3Y1 598 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 PCYOX1LQ8NBM8 494 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 OR52R1Q8NGF1 315 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 PAQR8Q8TEZ7 354 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 DIO2Q92813 273 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 VPS33AQ96AX1 596 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 SLC7A6OSQ96CW6 309 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 RCN3Q96D15 328 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF681Q96N22 645 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 BBS4Q96RK4 519 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 SLC35C2Q9NQQ7 365 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 MAT2BQ9NZL9 334 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 CNIH4Q9P003 139 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 NPFFR2Q9Y5X5 522 aa13.31□□□□□ -0.28
COMMD4-225ENST00000569245 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.31□□□□□ -0.28
COMMD4-225ENST00000569245 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 B2RBV5 119 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MRASO14807 208 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 GLSO94925 669 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-225ENST00000569245 NPPAP01160 153 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 TPOP07202 933 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 S1PR1P21453 382 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MPIP34949 423 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MAGEA5P43359 124 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 TMED10P49755 219 aaKnown RBP13.3□□□□□ -0.28
COMMD4-225ENST00000569245 FBXW4P57775 412 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MRPS35P82673 323 aaKnown RBP13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MGAT2Q10469 447 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 NNATQ16517 81 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 PRSS53Q2L4Q9 553 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF385BQ569K4 471 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 OR4F3Q6IEY1 312 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 ANKRD26P1Q6NSI1 321 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 RPTNQ6XPR3 784 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 C3P1Q6ZMU1 363 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 EID3Q8N140 333 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 TMEM251Q8N6I4 163 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF441Q8N8Z8 693 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 VPS37AQ8NEZ2 397 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 OR9A2Q8NGT5 310 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 KAT2AQ92830 837 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 ADIPOR1Q96A54 375 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 ROPN1LQ96C74 230 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 DOHHQ9BU89 302 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 RMND5AQ9H871 391 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 PRODH2Q9UF12 536 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 BTNL2Q9UIR0 455 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 BOKQ9UMX3 212 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms