RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 DSC2Q02487 901 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 GHRHRQ02643 423 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PAN2Q504Q3 1202 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SFRP4Q6FHJ7 346 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ZBTB44Q8NCP5 570 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OR5H2Q8NGV7 314 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 YIPF5Q969M3 257 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MIR1-1HGQ9H1L0 117 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 EXO1Q9UQ84 846 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 C9JVG2 144 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 JTBO76095 146 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CHRNA4P43681 627 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 POU6F2P78424 691 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 IRF5Q13568 498 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RAB31Q13636 194 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 KLBQ86Z14 1044 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CDH26Q8IXH8 852 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MFSD9Q8NBP5 474 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OR6M1Q8NGM8 313 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SFXN5Q8TD22 340 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 KLHL15Q96M94 604 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ABHD16BQ9H3Z7 469 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 LMAN1LQ9HAT1 526 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FBRSL1Q9HCM7 1045 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM100Q9NV29 134 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 AJAP1Q9UKB5 411 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MED16Q9Y2X0 877 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SLC22A7Q9Y694 548 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SMIM35A0A1B0GVV1 85 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OR51F1A6NGY5 319 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 H7BY64 318 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 VNN1O95497 513 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 HTR2CP28335 458 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MAGEA11P43364 429 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FXYD6P3P58550 94 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RHBDL3P58872 404 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TAS2R46P59540 309 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RPP30P78346 268 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PIGFQ07326 219 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PLA2G7Q13093 441 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TAZQ16635 292 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 INAVAQ3KP66 663 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CDONQ4KMG0 1287 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 APOBEC3HQ6NTF7 200 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CMIPQ8IY22 773 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RDH10Q8IZV5 341 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CELF2-AS1Q8N7Q2 184 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ACER1Q8TDN7 264 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 DUSP19Q8WTR2 217 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 HERVK_113Q902F9 699 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PINK1Q9BXM7 581 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MCCC2Q9HCC0 563 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 V9GY05 133 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TTLL8A6PVC2 850 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 HSPB2A8KAH6 182 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TP73O15350 636 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FHP07954 510 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 GAAP10253 952 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 AMY2BP19961 511 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 IDSP22304 550 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TNFRSF17Q02223 184 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 HSPB2Q16082 182 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MANEALQ5VSG8 457 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FBXO27Q8NI29 283 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SLC35F5Q8WV83 523 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OSMRQ99650 979 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SYT17Q9BSW7 474 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CRB3Q9BUF7 120 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 STRA6Q9BX79 667 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SLC5A7Q9GZV3 580 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PDZD7Q9H5P4 517 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 C2orf92A0A1B0GVN3 265 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 B3GALT2O43825 422 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 VIPP01282 170 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SFTPBP07988 381 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 EPHA4P54764 986 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 EMP3P54852 163 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RPL23AP62750 156 aaKnown RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MFSD13AQ14CX5 517 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.76□□□□□ -1.331e-6■■■□□ 18.6
CNOT1-216ENST00000569240 TMEM35AQ53FP2 167 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 TNFAIP8L2Q6P589 184 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SLC35D2Q76EJ3 337 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CLEC14AQ86T13 490 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CACUL1Q86Y37 369 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OR4K5Q8NGD3 323 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 UBQLN3Q9H347 655 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 OR6C2Q9NZP2 312 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms