RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TRIM49D1C9J1S8 452 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 H7C1Q1 480 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 MANBAO00462 879 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 HCRTR2O43614 444 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 ZIC3O60481 467 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 HEXAP06865 529 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 KRT20P35900 424 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 HTR6P50406 440 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 GAS1P54826 345 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 RAE1P78406 368 aaKnown RBP14.03□□□□□ -0.16
NME3-211ENST00000568561 STX5Q13190 355 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 GAB1Q13480 694 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 TSNAXIP1Q2TAA8 658 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 SHEQ5VZ18 495 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 C8orf74Q6P047 294 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 SYT10Q6XYQ8 523 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 P3H2Q8IVL5 708 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 OR4K17Q8NGC6 315 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 OR5M1Q8NGP8 315 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 ZNF675Q8TD23 568 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 FIG4Q92562 907 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 STARD4Q96DR4 205 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 WFIKKN1Q96NZ8 548 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 MRPL57Q9BQC6 102 aaKnown RBP14.03□□□□□ -0.16
NME3-211ENST00000568561 LRRC1Q9BTT6 524 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 EBPLQ9BY08 206 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 MRPL46Q9H2W6 279 aaKnown RBP14.03□□□□□ -0.16
NME3-211ENST00000568561 UBTD1Q9HAC8 227 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 VPS29Q9UBQ0 182 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 GNG14A0A1W2PPG7 69 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 POC1B-GALNT4F8VUJ3 575 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 MSTNO14793 375 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 SEC14L5O43304 696 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 CTIFO43310 598 aaKnown RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 PCDH7O60245 1069 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 SMPD2O60906 423 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ABCB7O75027 752 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 LY6G6DO95868 133 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 CHMP24386 653 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 TRA2BP62995 288 aaKnown RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 ZNF155Q12901 538 aaPredicted RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 EFR3AQ14156 821 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ERCC6LQ2NKX8 1250 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 SH2D4BQ5SQS7 431 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 TEX35Q5T0J7 233 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 ZNF550Q7Z398 422 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 BTLAQ7Z6A9 289 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 TMEM151AQ8N4L1 468 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 OR7G2Q8NG99 324 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 RNF138Q8WVD3 245 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ARSGQ96EG1 525 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 PGM2Q96G03 612 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ZC3HAV1LQ96H79 300 aaKnown RBP14.02□□□□□ -0.17
NME3-211ENST00000568561 COX4I2Q96KJ9 171 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 MED18Q9BUE0 208 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 DSN1Q9H410 356 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 FLRT3Q9NZU0 649 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 SENP1Q9P0U3 644 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 PPP4R1LQ9P1A2 415 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 MCM8Q9UJA3 840 aa14.02□□□□□ -0.17
NME3-211ENST00000568561 ARHGEF9O43307 516 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 HSD17B3P37058 310 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 CD79BP40259 229 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 CLDN15P56746 228 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 CLCQ05315 142 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 RAET1LQ5VY80 246 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 SCIMPQ6UWF3 145 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 TAOK1Q7L7X3 1001 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 CHMP1BQ7LBR1 199 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 CDC26Q8NHZ8 85 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 MTBPQ96DY7 904 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 PERPQ96FX8 193 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 APIPQ96GX9 242 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 Q96MF0 132 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 HS3ST6Q96QI5 342 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 C1QTNF3Q9BXJ4 246 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 ACPTQ9BZG2 426 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 NMRK1Q9NWW6 199 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 MED11Q9P086 117 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 OR10H1Q9Y4A9 318 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 FBN3Q75N90 2809 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 HIVEP2P31629 2446 aa14.01□□□□□ -0.17
NME3-211ENST00000568561 PRR14LQ5THK1 2151 aa14□□□□□ -0.17
NME3-211ENST00000568561 TRIM64A6NGJ6 449 aa14□□□□□ -0.17
NME3-211ENST00000568561 TRIM64BA6NI03 449 aa14□□□□□ -0.17
NME3-211ENST00000568561 H3BML4 177 aa14□□□□□ -0.17
NME3-211ENST00000568561 BCAS2O75934 225 aaPredicted RBP14□□□□□ -0.17
NME3-211ENST00000568561 SUPT7LO94864 414 aa14□□□□□ -0.17
NME3-211ENST00000568561 KRT6AP02538 564 aa14□□□□□ -0.17
NME3-211ENST00000568561 KRT6BP04259 564 aa14□□□□□ -0.17
NME3-211ENST00000568561 COL6A2P12110 1019 aa14□□□□□ -0.17
NME3-211ENST00000568561 HK1P19367 917 aa14□□□□□ -0.17
NME3-211ENST00000568561 PCSK6P29122 969 aa14□□□□□ -0.17
NME3-211ENST00000568561 EVI2BP34910 448 aa14□□□□□ -0.17
NME3-211ENST00000568561 KIR2DL2P43627 348 aaPredicted RBP14□□□□□ -0.17
NME3-211ENST00000568561 KCNJ5P48544 419 aa14□□□□□ -0.17
NME3-211ENST00000568561 KRT6CP48668 564 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms