RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BHLHE41Q9C0J9 482 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 SPAG17Q6Q759 2223 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 TRBV5-3A0A0A0MS03 114 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RNASET2O00584 256 aaKnown RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 CREBL2O60519 120 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 MMP20O60882 483 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RGS9O75916 674 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 ASGR1P07306 291 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 ZNF33BQ06732 778 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 CRHR2Q13324 411 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 TIGD3Q6B0B8 471 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 PYHIN1Q6K0P9 492 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 LIPIQ6XZB0 460 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 NKD1Q969G9 470 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 CPNE2Q96FN4 548 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 TREX2Q9BQ50 279 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 ALG8Q9BVK2 526 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 GNG8Q9UK08 70 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 NUBP2Q9Y5Y2 271 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 A0A0B4J293 547 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 TCRBV16S1A1N1A0A5B0 115 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 OR14I1A6ND48 311 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 SLC9B1P1A6NJY1 282 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 SOCS6O14544 535 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 MT-ND5P03915 603 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 NAT2P11245 290 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 HSD3B1P14060 373 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 EDNRAP25101 427 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 LIM2P55344 173 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 DGCR2P98153 550 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RING1Q06587 406 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RAB40BQ12829 278 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 SLC9A5Q14940 896 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 CCDC157Q569K6 752 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 TCTN3Q6NUS6 607 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RPTNQ6XPR3 784 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RAB42Q8N4Z0 105 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RELL2Q8NC24 303 aaPredicted RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 EID2BQ96D98 161 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RNF31Q96EP0 1072 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 C1QTNF7Q9BXJ2 289 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 CXorf36Q9H7Y0 433 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 DIMT1Q9UNQ2 313 aaKnown RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 NEU3Q9UQ49 428 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 A0A1B0GVI7 797 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 A0A1B0GVT2 93 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 HEPACAM2A8MVW5 462 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 MAGEB4O15481 346 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 PRICKLE3O43900 615 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 HMGN1P05114 100 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 ACP2P11117 423 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 PVALBP20472 110 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 CD79BP40259 229 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 WNT3P56703 355 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 STXBP1P61764 594 aaKnown RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 TAP2Q03519 686 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 METTL2BQ6P1Q9 378 aaKnown RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 SPAG16Q8N0X2 631 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 CHCHD4Q8N4Q1 142 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 AUTS2Q8WXX7 1259 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SMPDL3AQ92484 453 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 DPF3Q92784 378 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 METTL2AQ96IZ6 378 aaKnown RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 OR2M2Q96R28 347 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 AIF1LQ9BQI0 150 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SLC25A18Q9H1K4 315 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SYNPO2LQ9H987 977 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SCP2D1Q9UJQ7 156 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 PLEKHA6Q9Y2H5 1048 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 MNDAP41218 407 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 CCR4P51679 360 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 TEKQ02763 1124 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 ST3GAL3Q11203 375 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 NDUFA9Q16795 377 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SCGB2B2Q4G0G5 96 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 ACSM3Q53FZ2 586 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 XKR4Q5GH76 650 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 ZER1Q7Z7L7 766 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 LRRC28Q86X40 367 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 KCT2Q8NC54 265 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 WDR26Q9H7D7 661 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 NLGN3Q9NZ94 848 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 TMEM202A6NGA9 273 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 HYAL3O43820 417 aaPredicted RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 TPPPO94811 219 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 SLC2A10O95528 541 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 C1GALT1C1LP0DN25 315 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 GZMMP51124 257 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 APOOLQ6UXV4 268 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 OR2T33Q8NG76 320 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 OR6T1Q8NGN1 323 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 OR5W2Q8NH69 310 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
PALB2-206ENST00000568219 NXF2Q9GZY0 626 aaKnown RBP10.28□□□□□ -0.76
PALB2-206ENST00000568219 ADAP2Q9NPF8 381 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms