RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GABRA3P34903 492 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 PIGAP37287 484 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 MAGEA8P43361 318 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ST13P50502 369 aaKnown RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 FBXW4P57775 412 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 POU6F2P78424 691 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.622e-7■■■□□ 16.9
SF3B3-208ENST00000567250 GAB1Q13480 694 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 SAXO2Q658L1 398 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 TMEM81Q6P7N7 255 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ZNF621Q6ZSS3 439 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 C6orf120Q7Z4R8 191 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 MDGA2Q7Z553 956 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ZNF227Q86WZ6 799 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 FUNDC1Q8IVP5 155 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 BCORP1Q8N888 145 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 OR10G3Q8NGC4 313 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 VPS33AQ96AX1 596 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 DTNBP1Q96EV8 351 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 RMND5BQ96G75 393 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 G6PC3Q9BUM1 346 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 PIGUQ9H490 435 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 RAD21L1Q9H4I0 556 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 HHATLQ9HCP6 504 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 SERHLQ9NQF3 203 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 EXD2Q9NVH0 621 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 GPATCH2Q9NW75 528 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 LEF1Q9UJU2 399 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 CHCHD2Q9Y6H1 151 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 CAPN7Q9Y6W3 813 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 EML6Q6ZMW3 1958 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ASPDHA6ND91 283 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 SNX3O60493 162 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 TSPAN2O60636 221 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 C1QL1O75973 258 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 IL33O95760 270 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 SNRPB2P08579 225 aaKnown RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 CCL3P10147 92 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ZNF24P17028 368 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 CAPN3P20807 821 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ATP6V1C1P21283 382 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 CNR1P21554 472 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 DRD4P21917 467 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 MATN1P21941 496 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 PPIBP23284 216 aaKnown RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 MAP3K8P41279 467 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 MEOX1P50221 254 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 KCNJ2P63252 427 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 HPCAP84074 193 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 SNTA1Q13424 505 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 DUSP5Q16690 384 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 EXOSC6Q5RKV6 272 aaKnown RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ATAD3BQ5T9A4 648 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 WDR53Q7Z5U6 358 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 OR5M3Q8NGP4 307 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 CPT1CQ8TCG5 803 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 SPPL2AQ8TCT8 520 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 MIPOL1Q8TD10 442 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ZNF597Q96LX8 424 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 OR7D2Q96RA2 312 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 INPP5KQ9BT40 448 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 DOHHQ9BU89 302 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 BTBD2Q9BX70 525 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 OSBPL11Q9BXB4 747 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 TRIM4Q9C037 500 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 EPN3Q9H201 632 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 SAR1AQ9NR31 198 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 KLRF1Q9NZS2 232 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 B4GALT7Q9UBV7 327 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 RALYQ9UKM9 306 aaKnown RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 BOKQ9UMX3 212 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-208ENST00000567250 ABCG2Q9UNQ0 655 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 CORO2BQ9UQ03 480 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 NDUFAF1Q9Y375 327 aa11.19□□□□□ -0.62
SF3B3-208ENST00000567250 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 A0A096LPI6 279 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 PRAMEF25A6NGN4 478 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 SLC28A2O43868 658 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 PEX1O43933 1283 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 UGT2B11O75310 529 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 NME6O75414 186 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-208ENST00000567250 SNX4O95219 450 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 CDKN2CP42773 168 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 RFX3P48380 749 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 MASP1P48740 699 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 CLK3P49761 638 aaKnown RBP11.18□□□□□ -0.62
SF3B3-208ENST00000567250 GPR85P60893 370 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 PLGLB1Q02325 96 aa11.18□□□□□ -0.62
SF3B3-208ENST00000567250 UBAP2LQ14157 1087 aaKnown RBP11.18□□□□□ -0.62
SF3B3-208ENST00000567250 INPP5JQ15735 1006 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms