RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 B8ZZF3 427 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 SLC28A1O00337 649 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CCSO14618 274 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 NDUFS4O43181 175 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 OR10H3O60404 316 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TJP3O95049 919 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ACKR3P25106 362 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CCR8P51685 355 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ACLYP53396 1101 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 OSTNP61366 133 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TROAPQ12815 778 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CDH17Q12864 832 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GAB1Q13480 694 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 HLXQ14774 488 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 GUK1Q16774 197 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TATDN3Q17R31 274 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 POM121L1PQ3SYA9 428 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TMEM35AQ53FP2 167 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PAPD7Q5XG87 772 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 LPCAT4Q643R3 524 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 C11orf63Q6NUN7 778 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZNF544Q6NX49 715 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PRMT9Q6P2P2 845 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ULK3Q6PHR2 472 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 C16orf89Q6UX73 402 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 VITQ6UXI7 678 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZNF836Q6ZNA1 936 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 TBC1D10CQ8IV04 446 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CMTM8Q8IZV2 173 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 MREGQ8N565 214 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 SUMF1Q8NBK3 374 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 KLHDC9Q8NEP7 349 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 OCC1Q8TAD7 63 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ARNTL2Q8WYA1 636 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TMEM143Q96AN5 459 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TMEM45BQ96B21 275 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PYCR2Q96C36 320 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 FBXO17Q96EF6 278 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 AKR1E2Q96JD6 320 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZNF570Q96NI8 536 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 FYTTD1Q96QD9 318 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 FUNDC2Q9BWH2 189 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CADM1Q9BY67 442 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 LRRC2Q9BYS8 371 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 DPH1Q9BZG8 443 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GBA3Q9H227 469 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GANQ9H2C0 597 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PDZD7Q9H5P4 517 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ACTR5Q9H9F9 607 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 SAMSN1Q9NSI8 373 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 DDX19AQ9NUU7 478 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 SLC6A14Q9UN76 642 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZFR2Q9UPR6 939 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 FADS3Q9Y5Q0 445 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ELOA3CA0A087WX78 387 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 TEX13DA0A0J9YY54 714 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 ELOA3DA6NLF2 546 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 TMEM238C9JI98 176 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 C1QTNF3-AMACRE9PGA6 284 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 C5orf67F2Z3F1 127 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CHUKO15111 745 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 AQP9O43315 295 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GPX5O75715 221 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 SIX3O95343 332 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 GSRP00390 522 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 APOC1P02654 83 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ALDOCP09972 364 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 CDH5P33151 784 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 MPIP34949 423 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GPR12P47775 334 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 DUSP3P51452 185 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 RHOAP61586 193 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ESRRGP62508 458 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 YBX1P67809 324 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 E2F1Q01094 437 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 SPOCK1Q08629 439 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CDC20Q12834 499 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 EXOSC2Q13868 293 aaKnown RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 SERTAD2Q14140 314 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 GRB14Q14449 540 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ITIH4Q14624 930 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 CCDC6Q16204 474 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 LAMA3Q16787 3333 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PNLIPRP3Q17RR3 467 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ELOA3BQ3SY89 546 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 C5orf47Q569G3 176 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 SOHLH1Q5JUK2 328 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PXDC1Q5TGL8 231 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 IRAK1BP1Q5VVH5 260 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 FIGLAQ6QHK4 219 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 PAQR3Q6TCH7 311 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZNF621Q6ZSS3 439 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 LAX1Q8IWV1 398 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZDHHC23Q8IYP9 409 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 ZNF683Q8IZ20 524 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 HS3ST5Q8IZT8 346 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 DTWD1Q8N5C7 304 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 LMNTD1Q8N9Z9 388 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms