RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 EEF2KMTQ96G04 330 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 NDUFAF3Q9BU61 184 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 CARD6Q9BX69 1037 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 ASB8Q9H765 288 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 ISG20L2Q9H9L3 353 aaKnown RBP2.89□□□□□ -1.95
PALB2-203ENST00000565038 EXOSC3Q9NQT5 275 aaKnown RBP2.89□□□□□ -1.95
PALB2-203ENST00000565038 HOMER3Q9NSC5 361 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 DCAF13Q9NV06 445 aaKnown RBP2.89□□□□□ -1.95
PALB2-203ENST00000565038 MBD2Q9UBB5 411 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 DHRS7Q9Y394 339 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 TNRQ92752 1358 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 LATO43561 262 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 KERAO60938 352 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 TOXO94900 526 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 OLFM2O95897 454 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 PGK2P07205 417 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 STK19P49842 368 aaPredicted RBP2.88□□□□□ -1.95
PALB2-203ENST00000565038 SRYQ05066 204 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 CAPRIN1Q14444 709 aaKnown RBP2.88□□□□□ -1.95
PALB2-203ENST00000565038 BEND6Q5SZJ8 279 aaPredicted RBP2.88□□□□□ -1.95
PALB2-203ENST00000565038 ZNF57Q68EA5 555 aaPredicted RBP2.88□□□□□ -1.95
PALB2-203ENST00000565038 PARGQ86W56 976 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 CADM2Q8N3J6 435 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 CCNYQ8ND76 341 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 EXOC6Q8TAG9 804 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 C16orf74Q96GX8 76 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 TECTBQ96PL2 329 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 DPH7Q9BTV6 452 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 NMUR2Q9GZQ4 415 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 NACA2Q9H009 215 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 ELOVL2Q9NXB9 296 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 MTRRQ9UBK8 725 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 APPL1Q9UKG1 709 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 FLVCR1Q9Y5Y0 555 aa2.88□□□□□ -1.95
PALB2-203ENST00000565038 TRBV2A0A0J9YWF9 115 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 FAM231BA6NCW3 169 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 IMPA2O14732 288 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 STAM2O75886 525 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 SERF1AO75920 110 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 ACTL6AO96019 429 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 IGFBP1P08833 259 aaPredicted RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 H2AFZP0C0S5 128 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 MGMTP16455 207 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 PSMB1P20618 241 aaKnown RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 MAGEA4P43358 317 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 DIO3P55073 304 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 RPS6P62753 249 aaKnown RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 CAMK4Q16566 473 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 PARP6Q2NL67 630 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 HACD2Q6Y1H2 254 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 GOLGA7Q7Z5G4 137 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 C9orf40Q8IXQ3 194 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 C14orf178Q8N769 122 aaPredicted RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 OR52E1Q8NGJ3 308 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 WDR36Q8NI36 951 aaKnown RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 URGCPQ8TCY9 931 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 ADAMTS16Q8TE57 1224 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 FRAT1Q92837 279 aaPredicted RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 C19orf24Q9BVV8 132 aa2.87□□□□□ -1.95
PALB2-203ENST00000565038 STRAPQ9Y3F4 350 aaKnown RBP2.87□□□□□ -1.95
PALB2-203ENST00000565038 IGKV6D-21A0A0A0MT36 114 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 SYCE3A1L190 88 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ADAM12O43184 909 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 PGK1P00558 417 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ZP3P21754 424 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 SLC6A8P48029 635 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 RIPK4P57078 832 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 MYBPC1Q00872 1141 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 CBX3Q13185 183 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 LRIT3Q3SXY7 679 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ACSF3Q4G176 576 aaPredicted RBP2.86□□□□□ -1.95
PALB2-203ENST00000565038 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 SLX4IPQ5VYV7 408 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ETFRF1Q6IPR1 90 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 UFSP1Q6NVU6 142 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 MOB1BQ7L9L4 216 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 P4HA3Q7Z4N8 544 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 TICAM2Q86XR7 235 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 TGIF2LYQ8IUE0 185 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 CCDC36Q8IYA8 594 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ARFGAP2Q8N6H7 521 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ART4Q93070 314 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 DHTKD1Q96HY7 919 aaPredicted RBP2.86□□□□□ -1.95
PALB2-203ENST00000565038 ACAT2Q9BWD1 397 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 FTHL17Q9BXU8 183 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 ABCG8Q9H221 673 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 DUS2Q9NX74 493 aaKnown RBP2.86□□□□□ -1.95
PALB2-203ENST00000565038 GHRLQ9UBU3 117 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 TRIM10Q9UDY6 481 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 FETUBQ9UGM5 382 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 DNPEPQ9ULA0 475 aa2.86□□□□□ -1.95
PALB2-203ENST00000565038 DDX39AO00148 427 aaKnown RBP2.85□□□□□ -1.95
PALB2-203ENST00000565038 OR7A17O14581 309 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 ZNF254O75437 659 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 IGHV3-23P01764 117 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 PRDX6P30041 224 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 NF2P35240 595 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 UGT1A3P35503 534 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 IL9RQ01113 521 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms