RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 PPP4R4Q6NUP7 873 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 PIWIL3Q7Z3Z3 882 aaKnown RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 AMIGO2Q86SJ2 522 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 ESX1Q8N693 406 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 ZSCAN1Q8NBB4 408 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 OR5T3Q8NGG3 340 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 ADAMTS15Q8TE58 950 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 SLC38A5Q8WUX1 472 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 GEMIN6Q8WXD5 167 aaKnown RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 MAL2Q969L2 176 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 ZNF501Q96CX3 271 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 RBM18Q96H35 190 aaKnown RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 TMEM19Q96HH6 336 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 VPS50Q96JG6 964 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 HSH2DQ96JZ2 352 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 CIB1Q99828 191 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 FAM117AQ9C073 453 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 SLC7A5P2Q9GIP4 190 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 PRTFDC1Q9NRG1 225 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 GIN1Q9NXP7 522 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 C19orf53Q9UNZ5 99 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-203ENST00000564106 TP53TG5Q9Y2B4 290 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
UBFD1-203ENST00000564106 SEC16AO15027 2179 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 SPTAN1Q13813 2472 aaKnown RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 A0A0G2JPF8 293 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 CDC14CA4D256 554 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HNRNPCL2B2RXH8 293 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HNRNPCL3B7ZW38 293 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 H3BMH7 237 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 MASP2O00187 686 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 UPK1AO00322 258 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ADAMDEC1O15204 470 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 LDB3O75112 727 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 E2F6O75461 281 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 RASAL1O95294 804 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PGM3O95394 542 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HPRP00739 348 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 SEMG1P04279 462 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HNRNPCL4P0DMR1 293 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 UQCRBP14927 111 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 TCN2P20062 427 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 NT5EP21589 574 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 FBLP22087 321 aaKnown RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 AQP1P29972 269 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 AQP4P55087 323 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 IGLV3-21P80748 117 aaPredicted RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 KCNC4Q03721 635 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 MED21Q13503 144 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 LASP1Q14847 261 aaKnown RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ZNHIT3Q15649 155 aaPredicted RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 MFSD12Q6NUT3 480 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 TTLL10Q6ZVT0 673 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 C16orf62Q7Z3J2 963 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HIPK1Q86Z02 1210 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 GALNT12Q8IXK2 581 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 FAM86B1Q8N7N1 296 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 CDRT4Q8N9R6 151 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 OR51Q1Q8NH59 317 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 OR1L3Q8NH93 324 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 XAGE5Q8WWM1 108 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PROX1Q92786 737 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PMM1Q92871 262 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 UCN3Q969E3 161 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PEX11GQ96HA9 241 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 TPD52L3Q96J77 140 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ZNF597Q96LX8 424 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 RDH12Q96NR8 316 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 DGAT2Q96PD7 388 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 TRNT1Q96Q11 434 aaKnown RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 STACQ99469 402 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ZPBPQ9BS86 351 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 OSBPL11Q9BXB4 747 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 SPRTNQ9H040 489 aaPredicted RBP9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ZNF304Q9HCX3 659 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 BCL2L10Q9HD36 194 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 HCN3Q9P1Z3 774 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 NDOR1Q9UHB4 597 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 ZNF639Q9UID6 485 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 OAZ3Q9UMX2 235 aa9.07□□□□□ -0.96
UBFD1-203ENST00000564106 PRRC2CQ9Y520 2896 aaKnown RBP9.06□□□□□ -0.96
UBFD1-203ENST00000564106 G3V2T6 193 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 M0QX08 132 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 B4GALT2O60909 372 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 C1QCP02747 245 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 IFNW1P05000 195 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 OR12D1P0DN82 309 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 ZNF26P17031 533 aaPredicted RBP9.06□□□□□ -0.96
UBFD1-203ENST00000564106 ALAS2P22557 587 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 XCR1P46094 333 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 STT3AP46977 705 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 GCGRP47871 477 aa9.06□□□□□ -0.96
UBFD1-203ENST00000564106 CASP9P55211 416 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms