RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ADRM1Q16186 407 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 DUSP5Q16690 384 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 ZNF630Q2M218 657 aaPredicted RBP11.97□□□□□ -0.49
SPG7-209ENST00000564047 VMACQ2NL98 169 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 PLAG1Q6DJT9 500 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 SLC29A4Q7RTT9 530 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 MRGPREQ86SM8 312 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 PTOV1Q86YD1 416 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 ZZZ3Q8IYH5 903 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 MICU2Q8IYU8 434 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 METTL25Q8N6Q8 603 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 SLC16A11Q8NCK7 471 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 C11orf65Q8NCR3 313 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 ZNF248Q8NDW4 579 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 OR5D16Q8NGK9 328 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 OR8K3Q8NH51 312 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 SNIP1Q8TAD8 396 aaKnown RBP11.97□□□□□ -0.49
SPG7-209ENST00000564047 M1APQ8TC57 530 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 ELP5Q8TE02 316 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 SLC9A6Q92581 669 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 RAB8BQ92930 207 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 MUC13Q9H3R2 512 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 PIF1Q9H611 641 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 MMP25Q9NPA2 562 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 A4GALTQ9NPC4 353 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 EXD2Q9NVH0 621 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 P4HTMQ9NXG6 502 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 GMPR2Q9P2T1 348 aaKnown RBP11.97□□□□□ -0.49
SPG7-209ENST00000564047 ZNF223Q9UK11 482 aaPredicted RBP11.97□□□□□ -0.49
SPG7-209ENST00000564047 PCDHGB3Q9Y5G1 929 aa11.97□□□□□ -0.49
SPG7-209ENST00000564047 C2orf92A0A1B0GVN3 265 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 TMEM247A6NEH6 219 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 AK1P00568 194 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 TFPTP0C1Z6 253 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ARAFP10398 606 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
SPG7-209ENST00000564047 DRD5P21918 477 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 PPICP45877 212 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 SESN3P58005 492 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 RNF4P78317 190 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 PSG6Q00889 435 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 KCNC4Q03721 635 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 VEZF1Q14119 521 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.49
SPG7-209ENST00000564047 BTBD16Q32M84 506 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ATAD3BQ5T9A4 648 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 HEPHL1Q6MZM0 1159 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ZFP1Q6P2D0 407 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 HSDL2Q6YN16 418 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 WDR53Q7Z5U6 358 aaPredicted RBP11.96□□□□□ -0.49
SPG7-209ENST00000564047 VASH2Q86V25 355 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 PTRH1Q86Y79 214 aaKnown RBP11.96□□□□□ -0.49
SPG7-209ENST00000564047 SLC30A8Q8IWU4 369 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 FAM156AQ8NDB6 213 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 C17orf47Q8NEP4 570 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 OR5L2Q8NGL0 311 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 NUBPLQ8TB37 319 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 FBXO30Q8TB52 745 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 KCNE4Q8WWG9 221 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 XAGE5Q8WWM1 108 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ADIPOR1Q96A54 375 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 TP53INP1Q96A56 240 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ASB9Q96DX5 294 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 SLC35A4Q96G79 324 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 BTBD9Q96Q07 612 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ITPAQ9BY32 194 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 DPH1Q9BZG8 443 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 YY1AP1Q9H869 796 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 Q9N2J8 555 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 P2RX2Q9UBL9 471 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 USP22Q9UPT9 525 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 LIPT1Q9Y234 373 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 DTX4Q9Y2E6 619 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 GPR55Q9Y2T6 319 aaPredicted RBP11.96□□□□□ -0.49
SPG7-209ENST00000564047 ZNF451Q9Y4E5 1061 aa11.96□□□□□ -0.49
SPG7-209ENST00000564047 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.5
SPG7-209ENST00000564047 CROCCQ5TZA2 2017 aa11.96□□□□□ -0.5
SPG7-209ENST00000564047 TRBV11-1A0A0K0K1C0 115 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 FRG2CA6NGY1 282 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 A8MVJ9 347 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 TLX3O43711 291 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 PEX1O43933 1283 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 ZFAND5O76080 213 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 SORBS2O94875 1100 aaKnown RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 GGT1P19440 569 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 GABRA3P34903 492 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 TRHRP34981 398 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 PCGF2P35227 344 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 PSPHP78330 225 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CDK6Q00534 326 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 TRAP1Q12931 704 aaKnown RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 SCARB2Q14108 478 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 GNA13Q14344 377 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CRTC2Q53ET0 693 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms