RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CSTF1Q05048 431 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DMC1Q14565 340 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 CCDC14Q49A88 953 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 GTDC1Q4AE62 458 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 EOGTQ5NDL2 527 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TMEM215Q68D42 235 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SPECC1LQ69YQ0 1117 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 FBXL22Q6P050 247 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 CASC4Q6P4E1 433 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 RFWD3Q6PCD5 774 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 WDR59Q6PJI9 974 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 CORO6Q6QEF8 472 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 STRADAQ7RTN6 431 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TRMT11Q7Z4G4 463 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ADCK1Q86TW2 530 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 VSTM4Q8IW00 320 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 CNTN4Q8IWV2 1026 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 MCOLN2Q8IZK6 566 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DNAJC22Q8N4W6 341 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ALLCQ8N6M5 410 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ATP6V0D2Q8N8Y2 350 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SUMF1Q8NBK3 374 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DDHD1Q8NEL9 900 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DDI1Q8WTU0 396 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 RXFP2Q8WXD0 754 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 NTAN1Q96AB6 310 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 FAM122AQ96E09 287 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TMA16Q96EY4 203 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 C16orf45Q96MC5 204 aaPredicted RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 RUFY1Q96T51 708 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 GABRG3Q99928 467 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DDX50Q9BQ39 737 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TRAF4Q9BUZ4 470 aaPredicted RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 PELI2Q9HAT8 420 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ACKR4Q9NPB9 350 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 FLRT3Q9NZU0 649 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ADAM22Q9P0K1 906 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ACTR3BQ9P1U1 418 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 FBXW2Q9UKT8 454 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 BZW2Q9Y6E2 419 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 PTPRZ1P23471 2315 aaPredicted RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 KNL1Q8NG31 2342 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CABIN1Q9Y6J0 2220 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SYNJ2BP-COX16A0A087WUM0 186 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SLC9B1P1A6NJY1 282 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PCNX2A6NKB5 2137 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 F5H5T6 163 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SLCO1B7G3V0H7 640 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SLC22A2O15244 555 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 TBL1XO60907 577 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 KLF8O95600 359 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 APBB3O95704 486 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 MOCS2O96007 188 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PLEKP08567 350 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 KRT3P12035 628 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SKILP12757 684 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SDC4P31431 198 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CASP14P31944 242 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CEACAM8P31997 349 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CD70P32970 193 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PLK1P53350 603 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 AIF1P55008 147 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 RPS24P62847 133 aaKnown RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 HTD2P86397 168 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 OGDHQ02218 1023 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 LGALS3BPQ08380 585 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 KLHL30Q0D2K2 578 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 NME3Q13232 169 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 FAM174BQ3ZCQ3 159 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 RABGAP1LQ5R372 815 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 RNASEH2BQ5TBB1 312 aaKnown RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 GRTP1Q5TC63 336 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 TXNRD3NBQ6F5E7 133 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 DNAJC24Q6P3W2 148 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 UNC5DQ6UXZ4 953 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 PHLDB2Q86SQ0 1253 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 LGI2Q8N0V4 545 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 OR1J1Q8NGS3 322 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 FAM172AQ8WUF8 416 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 HEXDCQ8WVB3 486 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SLC13A3Q8WWT9 602 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 BCL2L2Q92843 193 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CENPTQ96BT3 561 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SNRNP40Q96DI7 357 aaKnown RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 SPDL1Q96EA4 605 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 GIMAP5Q96F15 307 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 MCEEQ96PE7 176 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 OLFM1Q99784 485 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 CNPY3Q9BT09 278 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 FNDC11Q9BVV2 318 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 TMEM245Q9H330 911 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 AKIRIN1Q9H9L7 192 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 ZDHHC4Q9NPG8 344 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 ELOVL2Q9NXB9 296 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 COX16Q9P0S2 106 aa4.32□□□□□ -1.72
LINC00254-201ENST00000563416 THAP10Q9P2Z0 257 aaPredicted RBP4.32□□□□□ -1.72
LINC00254-201ENST00000563416 RHCGQ9UBD6 479 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms