RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OTUB1Q96FW1 271 aaPredicted RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 RNF170Q96K19 258 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 RIPOR3Q96MK2 946 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 NRTNQ99748 197 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 YIPF4Q9BSR8 244 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 LGR4Q9BXB1 951 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 KLHL31Q9H511 634 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 KRCC1Q9NPI7 259 aaPredicted RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 TM7SF3Q9NS93 570 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 SEMA4GQ9NTN9 838 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 DPP7Q9UHL4 492 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 KLHL21Q9UJP4 597 aa12.28□□□□□ -0.44
USB1-207ENST00000563149 YARS2Q9Y2Z4 477 aaKnown RBP12.28□□□□□ -0.44
USB1-207ENST00000563149 NINQ8N4C6 2090 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 TCF20Q9UGU0 1960 aaKnown RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 LINC00854A0A1B0GVQ3 168 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 IGLON5A6NGN9 336 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 TFECO14948 347 aaPredicted RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 PGRMC2O15173 223 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 PPM1DO15297 605 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 SLC19A2O60779 497 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 OR5F1O95221 314 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 AGR2O95994 175 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 PRKAR1AP10644 381 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 SLC2A2P11168 524 aaPredicted RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 ACP5P13686 325 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ZNF24P17028 368 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 HTR1FP30939 366 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 BCL6P41182 706 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.451e-9■■■■■ 34.8
USB1-207ENST00000563149 MLF2Q15773 248 aaPredicted RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.27□□□□□ -0.45
USB1-207ENST00000563149 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 WASH2PQ6VEQ5 465 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 OLIG3Q7RTU3 272 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 TCTE3Q8IZS6 198 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ATP6V1C2Q8NEY4 427 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 GRPEL2Q8TAA5 225 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 TM9SF2Q99805 663 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ATF6BQ99941 703 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ACTRT3Q9BYD9 372 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 CTPS2Q9NRF8 586 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 LYARQ9NX58 379 aaKnown RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 NLGN3Q9NZ94 848 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 H2AFY2Q9P0M6 372 aaPredicted RBP12.27□□□□□ -0.45
USB1-207ENST00000563149 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 ATG4BQ9Y4P1 393 aa12.27□□□□□ -0.45
USB1-207ENST00000563149 GABRPO00591 440 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 KLF4O43474 513 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 PRICKLE3O43900 615 aaPredicted RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 AIFM1O95831 613 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 TRIM23P36406 574 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 RNF144AP50876 292 aaPredicted RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 CHRNEQ04844 493 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 ZNF155Q12901 538 aaPredicted RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 SF3A2Q15428 464 aaKnown RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 PGGHGQ32M88 737 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 CNIH2Q6PI25 160 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 TMEM107Q6UX40 140 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 MBOAT2Q6ZWT7 520 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 VRK2Q86Y07 508 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 MARCH9Q86YJ5 346 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 PEX5LQ8IYB4 626 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 Q8N402 240 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 OR8K5Q8NH50 307 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 DNAJA4Q8WW22 397 aaPredicted RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 TRIM63Q969Q1 353 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 ELP4Q96EB1 424 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 C16orf58Q96GQ5 468 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 FAM46AQ96IP4 442 aaKnown RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 TMEM246Q9BRR3 403 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 YIPF2Q9BWQ6 316 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 RMI1Q9H9A7 625 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 IL23AQ9NPF7 189 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 NUFIP1Q9UHK0 495 aaKnown RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 NDRG2Q9UN36 371 aaKnown RBP12.26□□□□□ -0.45
USB1-207ENST00000563149 GPR52Q9Y2T5 361 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 NOX1Q9Y5S8 564 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 KCNE3Q9Y6H6 103 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 ZNF780BQ9Y6R6 833 aa12.26□□□□□ -0.45
USB1-207ENST00000563149 CPSF4LA6NMK7 179 aaKnown RBP12.25□□□□□ -0.45
USB1-207ENST00000563149 SGK494L7N484 410 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 CHRM5P08912 532 aaPredicted RBP12.25□□□□□ -0.45
USB1-207ENST00000563149 ERP29P30040 261 aaKnown RBP12.25□□□□□ -0.45
USB1-207ENST00000563149 CTNNB1P35222 781 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 STXBP1P61764 594 aaKnown RBP12.25□□□□□ -0.45
USB1-207ENST00000563149 HEPHL1Q6MZM0 1159 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 PLEKHM3Q6ZWE6 761 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 C16orf62Q7Z3J2 963 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 LHFPL3Q86UP9 236 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
USB1-207ENST00000563149 SYT14Q8NB59 555 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms