RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 IGFBP2P18065 325 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 RCAN2Q14206 197 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 DECR1Q16698 335 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 ENPP6Q6UWR7 440 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 Q6ZSR9 355 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 LIX1LQ8IVB5 337 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 DDIASQ8IXT1 998 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 DMRTC2Q8IXT2 367 aaPredicted RBP15.35■□□□□ 0.05
CLK3-210ENST00000563112 WDSUB1Q8N9V3 476 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 ZFP28Q8NHY6 868 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 TCP10LQ8TDR4 215 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 CAVIN3Q969G5 261 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 GFM2Q969S9 779 aaKnown RBP15.35■□□□□ 0.05
CLK3-210ENST00000563112 EFHD2Q96C19 240 aaPredicted RBP15.35■□□□□ 0.05
CLK3-210ENST00000563112 ELP4Q96EB1 424 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 LRRC46Q96FV0 321 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 EGLN2Q96KS0 407 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 CCT7Q99832 543 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 OR2B2Q9GZK3 357 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 MCCC2Q9HCC0 563 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 Q9N2J8 555 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 SLC17A7Q9P2U7 560 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 DNAJC15Q9Y5T4 150 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 WIF1Q9Y5W5 379 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 PTGDR2Q9Y5Y4 395 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 CCDC168Q8NDH2 2452 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 TTC36A6NLP5 189 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 UPK1AO00322 258 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 IFI6P09912 130 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 DDX5P17844 614 aaKnown RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 TACR1P25103 407 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 SRD5A2P31213 254 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 GPC1P35052 558 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 TIMP3P35625 211 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 PSMD4P55036 377 aaKnown RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 RPL38P63173 70 aaKnown RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 PSG6Q00889 435 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 GALNTL6Q49A17 601 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 ARL13AQ5H913 290 aaPredicted RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 NSUN5P2Q63ZY6 315 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 OR2L13Q8N349 312 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 OR4N2Q8NGD1 307 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 OR2T11Q8NH01 316 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 PPCDCQ96CD2 204 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 ZNF764Q96H86 408 aaPredicted RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 WDYHV1Q96HA8 205 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 TRIB1Q96RU8 372 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 ZNF559Q9BR84 538 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 TUBB1Q9H4B7 451 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 REEP4Q9H6H4 257 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 SDHAF3Q9NRP4 125 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 TAS2R10Q9NYW0 307 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 CBLCQ9ULV8 474 aa15.34■□□□□ 0.05
CLK3-210ENST00000563112 ANKRD17O75179 2603 aaKnown RBP15.34■□□□□ 0.05
CLK3-210ENST00000563112 AKAP10O43572 662 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 TBX19O60806 448 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CHRNGP07510 517 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 PRPS2P11908 318 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CYP4B1P13584 511 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 GRK2P25098 689 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 MAPK1P28482 360 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CEACAM8P31997 349 aaPredicted RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 SERPINB5P36952 375 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 ASMTP46597 345 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CLK3P49761 638 aaKnown RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 RFTN2Q52LD8 501 aaPredicted RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 CES4AQ5XG92 561 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 AAGABQ6PD74 315 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 SEM1Q6ZVN7 128 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 ZNF551Q7Z340 670 aaPredicted RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 IFNEQ86WN2 208 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 TNIP2Q8NFZ5 429 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 OR4K17Q8NGC6 315 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CEP70Q8NHQ1 597 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 TWIST2Q8WVJ9 160 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 ZBED6CLQ96FA7 236 aaPredicted RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 FCRL1Q96LA6 429 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 PPP3R2Q96LZ3 170 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 TSSK3Q96PN8 268 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 MECRQ9BV79 373 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 CALHM2Q9HA72 323 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 SH3BP4Q9P0V3 963 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 PPP4R1LQ9P1A2 415 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 ZNF629Q9UEG4 869 aaPredicted RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 KCNN3Q9UGI6 736 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
CLK3-210ENST00000563112 MRPS18CQ9Y3D5 142 aaKnown RBP15.33■□□□□ 0.04
CLK3-210ENST00000563112 CD8B2A6NJW9 211 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 TMEM114B3SHH9 223 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 LSM1O15116 133 aaKnown RBP15.32■□□□□ 0.04
CLK3-210ENST00000563112 PSMG1O95456 288 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 CPN1P15169 458 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 SDC1P18827 310 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 BMP5P22003 454 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 PEX19P40855 299 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 MANFP55145 182 aaKnown RBP15.32■□□□□ 0.04
CLK3-210ENST00000563112 HSPB3Q12988 150 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 MYBPHQ13203 477 aa15.32■□□□□ 0.04
CLK3-210ENST00000563112 GAB1Q13480 694 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms