RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 LHX8Q68G74 356 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 TRILQ7L0X0 811 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SUN3Q8TAQ9 357 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 KLK6Q92876 244 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 CLIP3Q96DZ5 547 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 MRGPRX3Q96LB0 322 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 AMDHD1Q96NU7 426 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 TRAF4Q9BUZ4 470 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 DPEP2Q9H4A9 486 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SPHK2Q9NRA0 654 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SAGE1Q9NXZ1 904 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 PRKRAO75569 313 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 RFPL3O75679 317 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 SSR2P43308 183 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 METAP1P53582 386 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 RAB8AP61006 207 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 TRAM2Q15035 370 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 IL20RBQ6UXL0 311 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 KRT74Q7RTS7 529 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 PIGXQ8TBF5 258 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF431Q8TF32 576 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 DNAJA4Q8WW22 397 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 RFT1Q96AA3 541 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 NUS1Q96E22 293 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 DPH7Q9BTV6 452 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 CSNK1G3Q9Y6M4 447 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 LEUTXA8MZ59 168 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 PPM1DO15297 605 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 CCL16O15467 120 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 LANCL1O43813 399 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 C8AP07357 584 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 NTSP30990 170 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 PIP5KL1Q5T9C9 394 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 NDUFAF5Q5TEU4 345 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 OR2L2Q8NH16 312 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 MAP6Q96JE9 813 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 C17orf62Q9BQA9 187 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 SYNDIG1Q9H7V2 258 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC35C2Q9NQQ7 365 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ENAMQ9NRM1 1142 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 ASB6Q9NWX5 421 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 TNFRSF10DQ9UBN6 386 aa13.11□□□□□ -0.31
VPS9D1-202ENST00000561976 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 BTN3A3O00478 584 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 CASC3O15234 703 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 HRO43593 1189 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 DHFRP00374 187 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 STATHP02808 62 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 HMGN2P05204 90 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC6A1P30531 599 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 GPR4P46093 362 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 GNA13Q14344 377 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 AADACL4Q5VUY2 407 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 TMEM91Q6ZNR0 172 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 DCUN1D3Q8IWE4 304 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 OSTF1Q92882 214 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 NT5DC2Q9H857 520 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 BCL2L10Q9HD36 194 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 HCFC1R1Q9NWW0 138 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SURF4O15260 269 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC2A10O95528 541 aa13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 POU3F3P20264 500 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-202ENST00000561976 PTNP21246 168 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms